DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and crol

DIOPT Version :10

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_477243.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster


Alignment Length:393 Identity:121/393 - (30%)
Similarity:187/393 - (47%) Gaps:56/393 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 CTECGVSYSTQKALARHVAKHKEQGDT--------------------------QKPHLCDFCGRG 280
            |..|..:::.::.:..||.||  .|:|                          |.||.||.||:.
  Fly   335 CQYCAKTFTRKEHMVNHVRKH--TGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKK 397

  Fly   281 FRTNAQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHKCPQCDKTFYTRGNLRA 345
            :.....|..|.|.||.|.||:|.:|.|:::......:|:..|..|..|:|..|.|||..:.:|..
  Fly   398 YTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLN 462

  Fly   346 HIQRHTGERPYKCPDCPQTFAKNSGLKLHSRLHKEERPFKCELCGKGFVQNQHLITHLRVHNGDR 410
            |:::||||.|::|..|.:||.:...|..|.|.|..|.||||..|.|.|.:..|::.|:|.|.|:.
  Fly   463 HVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGES 527

  Fly   411 QFKCPDCDKSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSHLRIHTGEKPYKCDQCGK 475
            ..||..|.|:|..|.::..|.|.|:|..|.:|..|.:.|:...||.:|:|:|||:.|:||:.|.|
  Fly   528 PHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQK 592

  Fly   476 GFSANQSLMKHTLWHVDNN---------------------------DRPFKCSQCPKAYDTQQSL 513
            .|:..:.|..|...|..:|                           ||||.|..|.|::..:.:|
  Fly   593 TFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNL 657

  Fly   514 RGHEKTHKNPDEPKTLHQCPHCDVRFALKKTLDKHITSHK-IRPHPCPQCPEGFFSQKSLKKHLR 577
            ..|:::|....|.:....|..|...|..|..|..|:.||. .:||.|..|.:.|..:.:||:|::
  Fly   658 LFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMK 722

  Fly   578 LHN 580
            :::
  Fly   723 MNH 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 20..95 CDD:462262
C2H2 Zn finger 242..262 CDD:275368 4/19 (21%)
C2H2 Zn finger 274..294 CDD:275368 7/19 (37%)
SFP1 <296..374 CDD:227516 27/77 (35%)
COG5048 <299..486 CDD:227381 70/186 (38%)
C2H2 Zn finger 302..322 CDD:275368 4/19 (21%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
COG5048 <395..583 CDD:227381 63/214 (29%)
C2H2 Zn finger 414..434 CDD:275368 7/19 (37%)
C2H2 Zn finger 442..462 CDD:275368 7/19 (37%)
C2H2 Zn finger 470..486 CDD:275368 5/15 (33%)
C2H2 Zn finger 500..520 CDD:275368 5/19 (26%)
C2H2 Zn finger 532..552 CDD:275370 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275370 6/19 (32%)
crolNP_477243.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
COG5048 300..723 CDD:227381 121/389 (31%)
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368 4/19 (21%)
C2H2 Zn finger 363..383 CDD:275368 0/19 (0%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 4/19 (21%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 6/19 (32%)
C2H2 Zn finger 615..636 CDD:275368 0/20 (0%)
C2H2 Zn finger 644..664 CDD:275368 5/19 (26%)
C2H2 Zn finger 676..696 CDD:275368 6/19 (32%)
C2H2 Zn finger 704..722 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.

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