DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and CG17612

DIOPT Version :9

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster


Alignment Length:615 Identity:151/615 - (24%)
Similarity:244/615 - (39%) Gaps:143/615 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VKR-DEMPQKICPTCLVAAQNAFHFRHKCEQSFQFFSQLLQLDKS---NSNLSRSHCRRGTMNPL 118
            ||| ..:|:.:|..||  ..:.|..:||..:.....:..:.|:.|   ...|..        :||
  Fly    16 VKRGGSLPKTLCLQCL--HMDTFGTKHKGPRPETQINDKVHLEMSINGEDGLPE--------HPL 70

  Fly   119 IPFE--IVGCEDPLDTNVTKLDANRPDVKTDIDEPTDGKATNGQESEPLQEVFEITM--NDIKTE 179
            .|..  :|..||.|             :|..:.|...   .:.:|......:.::.:  |.....
  Fly    71 YPEVQLVVKEEDAL-------------IKKKVIEENH---IHNEEIIGASNIVDVEVHENHRANN 119

  Fly   180 DEVSIQETF-EDAFDEENDNNNTDSEREDSDQWTVGSTEDQDEPWIPGGGGRQTVGGNN---QSL 240
            |.:.||::| |:...|::..||.....:|       |..:::.|.|.    .:.:.|.:   :..
  Fly   120 DVILIQDSFAEEVILEDHPANNDVIIIQD-------SVAEEELPVIK----EEAIEGEDLQGEYF 173

  Fly   241 LCTEC-----------------------------GVSYSTQKALARHVAKHKEQGDTQKPHLC-- 274
            :.|||                             |:..:|  .|:::.....|:||:...::|  
  Fly   174 IITECLEEPAIGSCRVCLEQSDNLTNIFDDAHQYGIPIAT--ILSQYTGMPVEKGDSFSEYICVT 236

  Fly   275 --DFCGRGF------RTNAQLTTHRRRH------------------TGERPFKCPLCPKAYTHGP 313
              |.....|      ....|:....:..                  ||:.|.:||.|||.:....
  Fly   237 CLDVVKNAFDDLESKENTIQMYRQPKEEIIDIDSIPVKNKPVDYEVTGKPPHRCPQCPKIFLLAA 301

  Fly   314 TLKSHMHTHDEEKGH-----KCPQCDKTFYTRGNLRAH--IQRHTGER------PYKCPDCPQTF 365
            .|::|:.||:|.:..     |||.|...:..||.|.||  |.|.:.||      ||:||.||:.|
  Fly   302 KLQAHIRTHNETRTTEPPRLKCPMCPSIYMKRGCLEAHMWIHRASDERESELEPPYRCPHCPKLF 366

  Fly   366 AKNSGLKLHSRLHKE-------ERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFE 423
            ..:|.|::|.:.|::       :...||..|...|.....|..|:::|.|:|.||||.|..||.|
  Fly   367 LYSSFLEIHIQTHEDVSQRLSRKSSHKCAQCADVFSDVSSLKDHVKIHAGERTFKCPLCLMSFQE 431

  Fly   424 KSNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSHL-RIHTGEKPYKCDQCGKGFSANQSLMKHT 487
            :||:..|...|:   .|||.:|.:.|...::|..|. :.||.:.|:||.:|.:.|.....|.:|.
  Fly   432 ESNLKSHDCAHT---RFKCHKCSKFFESQNYLDFHFKKSHTTKGPFKCIKCQQTFQKRNGLKEHI 493

  Fly   488 LWHV-------DNNDRPFKCSQCPKAYDTQQSLRGHEKTHKNPDEPKTLHQCPHCDVRFALKKTL 545
            ...|       .:..:.|.|.:|||.:..:.:.:.|..|||........|.|..|...:..||.|
  Fly   494 SSQVCVQFLRSKSPGQIFPCPKCPKKFSIEDNYQMHHATHKKVKTVIERHNCTQCKKSYQNKKLL 558

  Fly   546 DKHITSHKIRPHPCPQCPEGFFSQKSLKKH 575
            .|||.||    :.|..|...|.|:..|::|
  Fly   559 TKHILSH----NRCVHCSMSFTSKYLLEQH 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 21..95 CDD:285071 10/37 (27%)
C2H2 Zn finger 242..262 CDD:275368 6/48 (13%)
C2H2 Zn finger 274..294 CDD:275368 4/29 (14%)
zf-H2C2_2 287..311 CDD:290200 8/41 (20%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
C2H2 Zn finger 330..350 CDD:275368 9/21 (43%)
zf-H2C2_2 342..366 CDD:290200 13/31 (42%)
C2H2 Zn finger 358..378 CDD:275368 8/19 (42%)
C2H2 Zn finger 386..406 CDD:275368 5/19 (26%)
COG5048 <395..583 CDD:227381 60/189 (32%)
zf-C2H2 412..434 CDD:278523 11/21 (52%)
C2H2 Zn finger 414..434 CDD:275368 9/19 (47%)
zf-H2C2_2 426..451 CDD:290200 8/24 (33%)
C2H2 Zn finger 442..462 CDD:275368 5/20 (25%)
zf-H2C2_2 454..478 CDD:290200 8/24 (33%)
C2H2 Zn finger 470..486 CDD:275368 4/15 (27%)
C2H2 Zn finger 500..520 CDD:275368 5/19 (26%)
C2H2 Zn finger 532..552 CDD:275370 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275370 6/17 (35%)
CG17612NP_608824.1 zf-AD 187..>246 CDD:285071 8/60 (13%)
C2H2 Zn finger 290..310 CDD:275368 7/19 (37%)
C2H2 Zn finger 323..343 CDD:275370 8/19 (42%)
zf-C2H2_8 356..438 CDD:292531 30/81 (37%)
C2H2 Zn finger 359..379 CDD:275368 8/19 (42%)
C2H2 Zn finger 394..414 CDD:275368 5/19 (26%)
C2H2 Zn finger 422..438 CDD:275368 8/15 (53%)
C2H2 Zn finger 447..463 CDD:275368 4/15 (27%)
C2H2 Zn finger 476..505 CDD:275368 6/28 (21%)
C2H2 Zn finger 513..533 CDD:275368 5/19 (26%)
C2H2 Zn finger 545..565 CDD:275368 8/19 (42%)
C2H2 Zn finger 568..584 CDD:275368 5/15 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006715
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.960

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