DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and LOC3290449

DIOPT Version :10

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_321891.6 Gene:LOC3290449 / 3290449 VectorBaseID:AGAMI1_005190 Length:354 Species:Anopheles gambiae


Alignment Length:486 Identity:99/486 - (20%)
Similarity:171/486 - (35%) Gaps:138/486 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MERSVDASMGKN-CRACAEHSSILVDLFSKEISDPPIWEMLNSILPEICRVKRDEMPQKICPTCL 72
            |:....|....| ||.|...::|      |.:|   ::..:......|.....|.:|.:||..|.
Mosquito     1 MDNFTSAQSASNICRGCGGQNAI------KPLS---VYGNVFKWCTSINVSSSDGLPTRICNRCW 56

  Fly    73 VAAQNAFHFRHKCEQSFQFFSQLLQLDKSNSNL---SRSHCRRGTMNPLIPFEIVGCEDPLDTNV 134
            .....::.|:..|.::.:.:.     .|:||::   |.........:...|||||          
Mosquito    57 EMLTISYEFKVICTRTDRQWR-----TKNNSDILIESFPVLENAVTDDYEPFEIV---------- 106

  Fly   135 TKLDANRPDVKTDIDEPTDGKATNGQESEPLQEVFEITMNDIKTEDEVSIQETFEDAFDEENDNN 199
                   .||:  ::|..:.....|...||...::. |:.:|.....:.::||.|....:..|.:
Mosquito   107 -------DDVQ--LEEVVEETMLPGTPKEPFDCLYN-TIPEIAEGIAIEVEETKEGELFKPEDLS 161

  Fly   200 NTDSEREDSDQWTVGSTEDQDEPWIPGGGGRQTVGGNNQSLLCTECGVSYSTQKALARHVAKHKE 264
            |.:|......:.|:...:|                       |.:. :....::.:...|.:.  
Mosquito   162 NVESYSLPEYKTTLLKVDD-----------------------CNQV-IDQDAREEVEEFVLED-- 200

  Fly   265 QGDTQKPHLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHK 329
                                   |......||:.     :|| |....|      .||:|:...:
Mosquito   201 -----------------------TVEYLEDTGKE-----MCP-AQDSAP------ETHNEDLSIE 230

  Fly   330 CPQCDKTFYTRGNLRAHIQRHTGERPYKCPDCPQTFAKNSGLKLHSRLHKEERPFKCELCGKGFV 394
            ..:.:....|..::|           :.||||.:.|:..:.:..|...|::.:|::|::|.|.|.
Mosquito   231 VFKTEPKLPTSRSVR-----------HSCPDCGKQFSSRTNVVRHQHSHRDSKPYQCDICKKEFT 284

  Fly   395 QNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSHL 459
            |:..|.|                            |:.:|..||||.|..||:.|:.:..:|.||
Mosquito   285 QSGTLKT----------------------------HRYSHFDIKPFVCNVCGKRFTQSKSVKLHL 321

  Fly   460 RIHTGEKPYKCDQCGKGFSANQSLMKHTLWH 490
            |.|||||||.||.|...|.....|.:|...|
Mosquito   322 RCHTGEKPYACDMCSAAFRQKNGLQRHMKVH 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 20..95 CDD:462262 15/75 (20%)
C2H2 Zn finger 242..262 CDD:275368 2/19 (11%)
C2H2 Zn finger 274..294 CDD:275368 1/19 (5%)
SFP1 <296..374 CDD:227516 15/77 (19%)
COG5048 <299..486 CDD:227381 50/186 (27%)
C2H2 Zn finger 302..322 CDD:275368 4/19 (21%)
C2H2 Zn finger 330..350 CDD:275368 2/19 (11%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
COG5048 <395..583 CDD:227381 31/96 (32%)
C2H2 Zn finger 414..434 CDD:275368 1/19 (5%)
C2H2 Zn finger 442..462 CDD:275368 8/19 (42%)
C2H2 Zn finger 470..486 CDD:275368 5/15 (33%)
C2H2 Zn finger 500..520 CDD:275368
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
LOC3290449XP_321891.6 None
Blue background indicates that the domain is not in the aligned region.

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