DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and CG2129

DIOPT Version :10

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_572449.1 Gene:CG2129 / 31741 FlyBaseID:FBgn0030008 Length:465 Species:Drosophila melanogaster


Alignment Length:539 Identity:130/539 - (24%)
Similarity:190/539 - (35%) Gaps:138/539 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 MLNSILPE----ICRVKRDEMPQKICPTCLVAAQNAFHFRHKCE----QSFQFFSQLLQLDK--- 100
            ||.|:.|:    :...|..|          :..|:...||..|.    :||.|...||.:..   
  Fly     1 MLKSLKPDTYAGMANAKCGE----------IYFQSLHSFRIDCAFCEMKSFVFGDFLLHVQNIHF 55

  Fly   101 -----------SNSNLSRSHCRR----------GTMNPLIPFEIVGCEDPLDTNVTKLDANRPDV 144
                       :.:||.:...|.          ..:||...:||.|     |.|....|......
  Fly    56 ENGLLKTEATDAGANLKQERDREREPNSPVPIVAQVNPFAWYEIGG-----DHNEDSDDERVVLE 115

  Fly   145 KTDIDEPTDGKATNGQESEPLQEVFEITMNDIKTEDEVSI-QETFEDAFDEENDNNNTDSEREDS 208
            |.|.||          :..|.:.:       ||.:|..|: .|:.......:.|....|||:|:.
  Fly   116 KQDEDE----------DERPGRSI-------IKWQDHQSLTSESLRQVRALKVDYKEEDSEQEEC 163

  Fly   209 DQWTVGSTEDQDEPWIPGGGGRQTVGGNNQSLLCTECGVSYSTQKALARHVAK-HK--------- 263
            .......:|.:....||..              |..|...|.::|.|.||:.: ||         
  Fly   164 GMELDLDSEGRHSAKIPHS--------------CPHCTKVYQSRKVLERHIMRQHKDTLSPDVDS 214

  Fly   264 EQGDTQKP-----------HLCDFCGRGFRTNAQLTTHRRR------HTGERPFKCPLCPKAYTH 311
            |..|.:.|           :.|:.||:.:.....|..|.:|      ..|...|.|..|......
  Fly   215 EDADYEPPKDAPVKSAAQEYKCEHCGKIYHGKYSLRQHLKRDHDNGEEGGSAIFTCLECEAQLPR 279

  Fly   312 GPTLKSHM-HTHDEEKGHKCPQCDKTFYTRGNLRAHIQRHTGERPYKCPDCPQTFAKNSGLKLHS 375
            ...|..|| ..|.   |..|..|.:.:.||..|:.|..:||.||...||        :.|     
  Fly   280 LRLLDEHMVQAHG---GAACVVCGRRYKTRHELKRHQLKHTSERNVPCP--------HPG----- 328

  Fly   376 RLHKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSGIKPF 440
                         |||.|...:|:..|.:||...:.|.|..|..|...|..:..|.|:|:|.:||
  Fly   329 -------------CGKRFFTIRHMRNHGKVHTEQKNFVCESCGYSCRNKETLRVHIRSHTGERPF 380

  Fly   441 KCEECGQAFSHNHHLKSHLRIHTGEKPYKCDQCGKGFSANQSLMKHTLWHVDNNDRPFKCSQCPK 505
            .|:.|.:.|..:..|:.|:.:|:.|:|:.|..||..||..:.|..|...|.|.  :.|.|..|..
  Fly   381 GCQVCDKRFPSHSGLREHMAMHSTERPHVCSVCGATFSRQKGLYHHKFLHADT--KQFVCKLCGN 443

  Fly   506 AYDTQQSLRGHEKTHKNPD 524
            ||.....|.||.:.|:|.:
  Fly   444 AYAQAAGLAGHMRKHRNDE 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 20..95 CDD:462262 13/55 (24%)
C2H2 Zn finger 242..262 CDD:275368 7/20 (35%)
C2H2 Zn finger 274..294 CDD:275368 6/25 (24%)
SFP1 <296..374 CDD:227516 22/78 (28%)
COG5048 <299..486 CDD:227381 54/187 (29%)
C2H2 Zn finger 302..322 CDD:275368 5/20 (25%)
C2H2 Zn finger 330..350 CDD:275368 6/19 (32%)
C2H2 Zn finger 358..378 CDD:275368 3/19 (16%)
C2H2 Zn finger 386..406 CDD:275368 6/19 (32%)
COG5048 <395..583 CDD:227381 42/130 (32%)
C2H2 Zn finger 414..434 CDD:275368 6/19 (32%)
C2H2 Zn finger 442..462 CDD:275368 5/19 (26%)
C2H2 Zn finger 470..486 CDD:275368 6/15 (40%)
C2H2 Zn finger 500..520 CDD:275368 7/19 (37%)
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
CG2129NP_572449.1 SFP1 <180..258 CDD:227516 19/91 (21%)
C2H2 Zn finger 296..316 CDD:275370 6/19 (32%)
zf-C2H2_8 323..411 CDD:464935 30/113 (27%)
C2H2 Zn finger 327..346 CDD:275368 7/36 (19%)
C2H2 Zn finger 354..374 CDD:275368 6/19 (32%)
SFP1 <376..461 CDD:227516 29/86 (34%)
C2H2 Zn finger 382..402 CDD:275368 5/19 (26%)
C2H2 Zn finger 410..430 CDD:275368 7/19 (37%)
C2H2 Zn finger 438..458 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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