DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and Zfp58

DIOPT Version :9

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001007576.1 Gene:Zfp58 / 238693 MGIID:99205 Length:489 Species:Mus musculus


Alignment Length:402 Identity:135/402 - (33%)
Similarity:205/402 - (50%) Gaps:61/402 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 QTVGGNNQSLLCTECGVSYSTQKALARHVAKHKEQGDTQKPHLCDFCGRGFRTNAQLTTHRRRHT 295
            |.:....::..|.|||.:::.:..|:.|...|    ..:||:.|:.||:.||..::|:||:|.||
Mouse    97 QRIRTGEKAFKCEECGKAFNNRSNLSEHKRIH----TGEKPYKCEECGKAFRIRSKLSTHQRVHT 157

  Fly   296 GERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHKCPQCDKTFYTRGNLRAHIQRHTGERPYKCPD 360
            ||:|:||..|.||:.....|..|...|..||.:||.:|.|.|.||.....|.:.|||::||||.:
Mouse   158 GEKPYKCEECGKAFNSHSNLSEHKRIHTGEKPYKCEECGKAFSTRSTYYRHQKNHTGKKPYKCEE 222

  Fly   361 CPQTFAKNSGLKLHSRLHKEERPFKCELCGKGF----VQNQHLI--------------------- 400
            |.:.|:..|.||:|.|:|..|:.:|||.|||.|    :..:|.|                     
Mouse   223 CAKEFSYPSLLKVHQRIHSAEKSYKCEECGKPFYCPLLLKKHQIIHSAEKPYKCAECGKAFHYPS 287

  Fly   401 ---THLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSHLRIH 462
               .|.|:|.|.:..||.|||::|:..:.:.:|||.||....:||.|||:.|....||:.|.|.|
Mouse   288 LLKRHQRIHAGKKPCKCKDCDRAFYSSAFLKRHQRIHSEENSYKCGECGKRFCSFPHLQYHQRFH 352

  Fly   463 TGEKPYKCDQCGKGFSANQSLMKHTLWHVDNNDRPFKCSQCPKAYDTQQSLRGHEKTHK------ 521
            :|||||||:||||.||....|..|.|.|  :.::.:||.:|.|.:.:...|:.|:|.|:      
Mouse   353 SGEKPYKCEQCGKTFSTLSYLPWHKLRH--SGEKSYKCEKCGKMFYSTLDLKKHQKIHEYKCGEC 415

  Fly   522 -----------------NPDEPKTLHQCPHCDVRFALKKTLDKHITSHK-IRPHPCPQCPEGFFS 568
                             ..::|   |.|..|...|:...:|::|...|. .:|:.|.:|.:.|:.
Mouse   416 HYGFPNYAALTAHQRVHTGEKP---HVCEQCGKDFSRIDSLNQHQLVHTGEKPYKCEKCGKCFYR 477

  Fly   569 QKSLKKHLRLHN 580
            ..|||:|..:|:
Mouse   478 SSSLKRHQGIHS 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 21..95 CDD:285071
C2H2 Zn finger 242..262 CDD:275368 6/19 (32%)
C2H2 Zn finger 274..294 CDD:275368 9/19 (47%)
zf-H2C2_2 287..311 CDD:290200 14/23 (61%)
C2H2 Zn finger 302..322 CDD:275368 6/19 (32%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
zf-H2C2_2 342..366 CDD:290200 9/23 (39%)
C2H2 Zn finger 358..378 CDD:275368 8/19 (42%)
C2H2 Zn finger 386..406 CDD:275368 10/47 (21%)
COG5048 <395..583 CDD:227381 70/234 (30%)
zf-C2H2 412..434 CDD:278523 9/21 (43%)
C2H2 Zn finger 414..434 CDD:275368 8/19 (42%)
zf-H2C2_2 426..451 CDD:290200 11/24 (46%)
C2H2 Zn finger 442..462 CDD:275368 9/19 (47%)
zf-H2C2_2 454..478 CDD:290200 16/23 (70%)
C2H2 Zn finger 470..486 CDD:275368 8/15 (53%)
C2H2 Zn finger 500..520 CDD:275368 6/19 (32%)
C2H2 Zn finger 532..552 CDD:275370 5/19 (26%)
C2H2 Zn finger 559..579 CDD:275370 7/19 (37%)
Zfp58NP_001007576.1 KRAB 2..61 CDD:214630
KRAB 2..41 CDD:279668
C2H2 Zn finger 80..100 CDD:275368 1/2 (50%)
COG5048 106..489 CDD:227381 133/391 (34%)
C2H2 Zn finger 108..128 CDD:275368 6/19 (32%)
zf-H2C2_2 120..143 CDD:290200 8/26 (31%)
C2H2 Zn finger 136..156 CDD:275368 9/19 (47%)
zf-H2C2_2 149..173 CDD:290200 14/23 (61%)
C2H2 Zn finger 164..184 CDD:275368 6/19 (32%)
zf-H2C2_2 176..201 CDD:290200 10/24 (42%)
C2H2 Zn finger 192..212 CDD:275368 7/19 (37%)
C2H2 Zn finger 220..240 CDD:275368 8/19 (42%)
C2H2 Zn finger 248..268 CDD:275368 8/19 (42%)
C2H2 Zn finger 276..296 CDD:275368 2/19 (11%)
C2H2 Zn finger 304..324 CDD:275368 8/19 (42%)
C2H2 Zn finger 332..352 CDD:275368 9/19 (47%)
zf-H2C2_2 344..369 CDD:290200 17/24 (71%)
C2H2 Zn finger 360..380 CDD:275368 10/19 (53%)
C2H2 Zn finger 388..408 CDD:275368 6/19 (32%)
C2H2 Zn finger 412..432 CDD:275368 0/19 (0%)
zf-H2C2_2 424..449 CDD:290200 5/27 (19%)
C2H2 Zn finger 440..460 CDD:275368 5/19 (26%)
C2H2 Zn finger 468..488 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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