DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and Zfp90

DIOPT Version :9

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001355257.1 Gene:Zfp90 / 22751 MGIID:104786 Length:656 Species:Mus musculus


Alignment Length:596 Identity:163/596 - (27%)
Similarity:252/596 - (42%) Gaps:152/596 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 PLIPFEIVGCEDPLDTNVTKLDANR---PDVKTDIDEPTDGKATNGQESEPLQEVFEI------- 171
            |.:.|::...|:|.   :::.:..|   ||.||   .|...::       |.|.|.|:       
Mouse    80 PEVIFKLEQGEEPW---ISEKEIQRPFCPDWKT---RPESSRS-------PQQGVSEVFLRTNVL 131

  Fly   172 ---TMNDI--------------KTEDEVSIQE---TFEDAFDE----ENDNNNTD--------SE 204
               |:.||              ....|.|.|:   |.|...::    |:.:.:||        |.
Mouse   132 SHTTIGDIWNVAIQGHQESGRRHLGPEASSQKKITTLEKKIEQNKVGEDSSLSTDLVPQLDISSS 196

  Fly   205 REDSDQWTVGSTEDQDEPWIPGGGGRQTVGGNNQSLLCTECGVSYSTQKALARHVAKHK------ 263
            ...||..|.|:..:.:...:.    :..:....:...|.:|..|:..:.:|.:|...||      
Mouse   197 IRPSDCKTFGNNLEHNSELVT----QSNILAKKKPYKCDKCRKSFIHRSSLNKHEKIHKGDPYSN 257

  Fly   264 --EQG--DTQKPHLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDE 324
              :||  ..:|.|.|..||:.|....|||.|:|.||||:||:|.:|.||:.|..:|..|.:.|..
Mouse   258 GTDQGAQSGRKHHECADCGKTFLWRTQLTEHQRIHTGEKPFECNVCGKAFRHSSSLGQHENAHTG 322

  Fly   325 EKGHKCPQCDKTFYTRGNLRAHIQRHTGERPYK----------------------------CPDC 361
            ||.::|..|.|.|....:|..|.:.||||:||:                            |.:|
Mouse   323 EKPYQCSLCGKAFQRSSSLVQHQRIHTGEKPYRCNLCGRSFRHSTSLTQHEVTHSGEKPFQCKEC 387

  Fly   362 PQTFAKNSGLKLHSRLHKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFK------------- 413
            .:.|::.|.|..|.|.|..|:||:|.:||:.|.|:..|..|:|:|...:.::             
Mouse   388 GKAFSRCSSLVQHERTHTGEKPFECSICGRAFGQSPSLYKHMRIHKRSKPYQSNNFSLAFVPNTP 452

  Fly   414 ---------------CPDCDKSFFEKSNMMKHQRTHSG--------------------IKPFKCE 443
                           |.||.|.|...::..:|||.|:|                    .||::|.
Mouse   453 LPQGEGLLTEVKSYHCNDCGKDFGHITDFSEHQRLHAGENSYGSEQTLLGQQSLSHPREKPYQCN 517

  Fly   444 ECGQAFSHNHHLKSHLRIHTGEKPYKCDQCGKGFSANQSLMKHTLWHVDNNDRPFKCSQCPKAYD 508
            .||:||..:.....|.|||||||||:|::||:.||...||.:|...|  ..::|::|..|.||:.
Mouse   518 VCGKAFKRSTSFIEHHRIHTGEKPYECNECGEAFSRLSSLTQHERTH--TGEKPYECIDCGKAFS 580

  Fly   509 TQQSLRGHEKTHKNPDEPKTLHQCPHCDVRFALKKTLDKHITSHK-IRPHPCPQCPEGFFSQKSL 572
            ...||..||:||.. ::|   ::|..|...|..|..|..|..:|. .:|:.|.:|...|....:|
Mouse   581 QSSSLIQHERTHTG-EKP---YECNECGRAFRKKTNLHDHQRTHTGEKPYACKECGRNFSRSSAL 641

  Fly   573 KKHLRLHNLKK 583
            .||.|:|...|
Mouse   642 TKHHRVHARNK 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 21..95 CDD:285071
C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 274..294 CDD:275368 9/19 (47%)
zf-H2C2_2 287..311 CDD:290200 14/23 (61%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
C2H2 Zn finger 330..350 CDD:275368 6/19 (32%)
zf-H2C2_2 342..366 CDD:290200 10/51 (20%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
COG5048 <395..583 CDD:227381 69/236 (29%)
zf-C2H2 412..434 CDD:278523 8/49 (16%)
C2H2 Zn finger 414..434 CDD:275368 8/19 (42%)
zf-H2C2_2 426..451 CDD:290200 12/44 (27%)
C2H2 Zn finger 442..462 CDD:275368 7/19 (37%)
zf-H2C2_2 454..478 CDD:290200 13/23 (57%)
C2H2 Zn finger 470..486 CDD:275368 7/15 (47%)
C2H2 Zn finger 500..520 CDD:275368 8/19 (42%)
C2H2 Zn finger 532..552 CDD:275370 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275370 7/19 (37%)
Zfp90NP_001355257.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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