DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and xlcgf26.1l

DIOPT Version :10

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_031749206.1 Gene:xlcgf26.1l / 108645154 XenbaseID:XB-GENE-22065104 Length:1159 Species:Xenopus tropicalis


Alignment Length:562 Identity:171/562 - (30%)
Similarity:241/562 - (42%) Gaps:132/562 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 IPFEIVGCEDPLDTNVTKLDANRPDVKTDIDEPTDGKATNGQESEPLQEVFEITMNDIKTED--- 180
            |..|....||.||:    ||:        .|.||||::.         ||.|...|::.||:   
 Frog    49 IKHEDTDWEDDLDS----LDS--------ADSPTDGESL---------EVKEEDKNNLTTENSEI 92

  Fly   181 ------------EVSIQETFEDAFDEE-------------NDNNNTDSE-------REDS----- 208
                        :|.::||....:.:.             |...|..||       |::|     
 Frog    93 GSPSDTEDPEIIQVKVEETESITYPDSMISSSLTAGENRLNVQRNWVSETSRLWRKRQNSALTEA 157

  Fly   209 ----DQWTVG---------------------------------------------STEDQDEPWI 224
                |....|                                             |::.:::|:|
 Frog   158 SYYPDTLDTGREPLQSAAGLGGLEPATDSGFSCHKCSKCFATSSDLITHQCHSRCSSKAEEKPFI 222

  Fly   225 PGGGG-----------RQTVGGNNQSLLCTECGVSYSTQKALARHVAKHKEQGDTQKPHLCDFCG 278
            ....|           .|.|....:...|.|||.|:|.:::|.||...|  .||  ||..|..||
 Frog   223 CLECGERFSRKSILQSHQRVHTGEKPFTCKECGKSFSEKRSLHRHQTIH--TGD--KPFKCTECG 283

  Fly   279 RGFRTNAQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHKCPQCDKTFYTRGNL 343
            :.|.....|..|.|.||||:||.|..|.:.::....|.||...|...|...|..|.|.|..:..|
 Frog   284 KAFAEKTTLHNHLRVHTGEKPFTCSECGRKFSQKTNLYSHHKVHTGVKQFSCTICAKGFSEKTAL 348

  Fly   344 RAHIQRHTGERPYKCPDCPQTFAKNSGLKLHSRLHKEERPFKCELCGKGFVQNQHLITHLRVHNG 408
            ..|::.|||||||.|.:|.:.||:...|..|..:|..::||||..|||.|.:...|.||..:|.|
 Frog   349 TIHLRGHTGERPYTCTECGKGFAQKCTLTAHQNIHLGKKPFKCTECGKTFSKKCSLTTHWNIHLG 413

  Fly   409 DRQFKCPDCDKSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSHLRIHTGEKPYKCDQC 473
            .:.|.|..|.|||.::|.:..|...|:|.|||.|.|||::||..:..:.||.|||||||:.|.||
 Frog   414 VKPFICAVCGKSFSQRSILHNHMAVHTGAKPFTCSECGKSFSLKNDFQRHLIIHTGEKPFTCTQC 478

  Fly   474 GKGFSANQSLMKHTLWHVDNNDRPFKCSQCPKAYDTQQSLRGHEKTHKNPDEPKTLHQCPHCDVR 538
            |:.||...:|..|  |:....::||.||||.:.:....||:.|.|.|.. ::|.|   ||.|...
 Frog   479 GESFSRKSTLNTH--WNTHTGEKPFTCSQCGERFSRNSSLKAHWKIHTG-EKPFT---CPQCGES 537

  Fly   539 FALKKTLDKHITSHK-IRPHPCPQCPEGFFSQKSLKKHLRLH 579
            |:.|.:|:.|...|. .:|..|.:|.:.|..:.||.||:|:|
 Frog   538 FSRKSSLNTHWILHTGEKPFTCRECGKSFSVRNSLHKHMRVH 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 20..95 CDD:462262
C2H2 Zn finger 242..262 CDD:275368 9/19 (47%)
C2H2 Zn finger 274..294 CDD:275368 7/19 (37%)
SFP1 <296..374 CDD:227516 29/77 (38%)
COG5048 <299..486 CDD:227381 77/186 (41%)
C2H2 Zn finger 302..322 CDD:275368 5/19 (26%)
C2H2 Zn finger 330..350 CDD:275368 6/19 (32%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
COG5048 <395..583 CDD:227381 73/186 (39%)
C2H2 Zn finger 414..434 CDD:275368 7/19 (37%)
C2H2 Zn finger 442..462 CDD:275368 8/19 (42%)
C2H2 Zn finger 470..486 CDD:275368 7/15 (47%)
C2H2 Zn finger 500..520 CDD:275368 8/19 (42%)
C2H2 Zn finger 532..552 CDD:275370 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275370 8/19 (42%)
xlcgf26.1lXP_031749206.1 C2H2 Zn finger 190..209 CDD:275368 0/18 (0%)
COG5048 219..>545 CDD:227381 127/335 (38%)
C2H2 Zn finger 223..243 CDD:275368 2/19 (11%)
C2H2 Zn finger 251..271 CDD:275368 9/19 (47%)
C2H2 Zn finger 279..299 CDD:275368 7/19 (37%)
C2H2 Zn finger 307..327 CDD:275368 5/19 (26%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 9/21 (43%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 835..877 CDD:275368
COG5048 <855..1071 CDD:227381
C2H2 Zn finger 885..905 CDD:275368
C2H2 Zn finger 913..933 CDD:275368
C2H2 Zn finger 941..961 CDD:275368
C2H2 Zn finger 969..989 CDD:275368
C2H2 Zn finger 997..1017 CDD:275368
C2H2 Zn finger 1025..1045 CDD:275368
C2H2 Zn finger 1053..1073 CDD:275368
C2H2 Zn finger 1081..1101 CDD:275368
zf-C2H2 1107..1129 CDD:395048
C2H2 Zn finger 1109..1129 CDD:275368
C2H2 Zn finger 1137..1157 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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