DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and LOC100329723

DIOPT Version :9

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_017210872.1 Gene:LOC100329723 / 100329723 -ID:- Length:383 Species:Danio rerio


Alignment Length:394 Identity:134/394 - (34%)
Similarity:193/394 - (48%) Gaps:27/394 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 IKTEDE-VSIQETFEDAFDEENDNNNTDSE--REDSDQWTVGSTEDQ-----DEPWI---PGGGG 229
            ||.|.| |.|:|||  ...:|:....||..  :|::.||.....:.|     ::|.:   ....|
Zfish     4 IKEESEDVEIEETF--IVKQEDLQEQTDLMVLKEETHQWNKMEEQHQEITADEKPTLTEKTSSLG 66

  Fly   230 RQTVGGNNQSLLCTECGVSYSTQKALARHVAKHKEQGDTQKPHLCDFCGRGFRTNAQLTTHRRRH 294
            |........:|...:|..|:..:..|..|:..|..    :||:.|:.||:.|.....|.||.|.|
Zfish    67 RPRKSKTECNLSSKQCRKSFIQKLNLGDHMRVHTR----EKPYTCEQCGKSFGKKRSLKTHMRIH 127

  Fly   295 TGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHKCPQCDKTFYTRGNLRAHIQRHTGERPYKCP 359
            |||||:.|..|.|::....|||.||..|..|:.:.|.||.|:|.....|:.|::.|||||||.|.
Zfish   128 TGERPYTCQQCGKSFKQIGTLKGHMRIHTGERPYTCQQCGKSFKQSATLKGHMRSHTGERPYTCQ 192

  Fly   360 DCPQTFAKNSGLKLHSRLHKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFEK 424
            .|.|:|........|.|:|..|:|:.|:.|||.|.|:..|.:|:|:|||.:    ..|.|||.:|
Zfish   193 QCGQSFYYAGNFAAHKRIHTGEKPYTCQQCGKSFKQSGTLKSHMRIHNGGK----TQCGKSFAQK 253

  Fly   425 SNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSHLRIHTGEKPYKCDQCGKGFSANQSLMKHTLW 489
            .....|...|:..||::|.|||::|:....|.:|::.||.||.:.|:||.|.|:...:||.|...
Zfish   254 QKFDTHMTIHTEEKPYRCTECGKSFTCKSSLINHMKTHTREKLFTCNQCEKSFTCKANLMNHMDG 318

  Fly   490 HVDNNDRPFKCSQCPKAYDTQQSLRGHEKTHKNPDEPKTLHQCPHCDVRFALKKTLDKHITSHKI 554
            |..|  ..|.|.||.|:...:..::.|.|||...|.    .:|..|.:.|..|..|..|:..|..
Zfish   319 HSGN--IVFICDQCGKSLTRKDYIKQHMKTHSREDR----FRCSECGISFKQKINLSAHMKLHNA 377

  Fly   555 RPHP 558
            ...|
Zfish   378 EQSP 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 21..95 CDD:285071
C2H2 Zn finger 242..262 CDD:275368 4/19 (21%)
C2H2 Zn finger 274..294 CDD:275368 8/19 (42%)
zf-H2C2_2 287..311 CDD:290200 13/23 (57%)
C2H2 Zn finger 302..322 CDD:275368 8/19 (42%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
zf-H2C2_2 342..366 CDD:290200 12/23 (52%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
C2H2 Zn finger 386..406 CDD:275368 9/19 (47%)
COG5048 <395..583 CDD:227381 55/164 (34%)
zf-C2H2 412..434 CDD:278523 6/21 (29%)
C2H2 Zn finger 414..434 CDD:275368 6/19 (32%)
zf-H2C2_2 426..451 CDD:290200 9/24 (38%)
C2H2 Zn finger 442..462 CDD:275368 7/19 (37%)
zf-H2C2_2 454..478 CDD:290200 10/23 (43%)
C2H2 Zn finger 470..486 CDD:275368 7/15 (47%)
C2H2 Zn finger 500..520 CDD:275368 6/19 (32%)
C2H2 Zn finger 532..552 CDD:275370 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275370 134/394 (34%)
LOC100329723XP_017210872.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100488
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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