DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and Gm3604

DIOPT Version :10

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001156382.1 Gene:Gm3604 / 100041979 MGIID:3781781 Length:559 Species:Mus musculus


Alignment Length:548 Identity:176/548 - (32%)
Similarity:257/548 - (46%) Gaps:108/548 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 WEMLNSILPEICRVKRDEMPQKICPTCLVAAQNAFHFRH-KCE--QSFQFFSQLLQLDKSNSNLS 106
            ||..|  :.|.|:..|                     || :||  ||.:..|:..|.||:.:...
Mouse    47 WEAQN--IEEYCQSSR---------------------RHRRCERSQSAEKPSEYTQRDKAFALHD 88

  Fly   107 RSHCRR--GTMNPLIPFEIVGC-EDPLDTNVTKLDANRPDVKTDIDEPTDGKATNGQESEPLQEV 168
            .||.:|  ......||.|::.| ||.|.  .|.|..::             :...||:.....:.
Mouse    89 HSHAQRHERVHTEKIPSEVIHCVEDFLP--YTSLQVHK-------------RTQTGQKPYECNQC 138

  Fly   169 FE--ITMNDIKTEDEVSIQETFEDAFDEENDNNNTDSEREDSDQWTVGSTEDQDEPWIPGGGGRQ 231
            .:  :..:.:|..:.....|                                  :|:        
Mouse   139 GKGFVMPSCLKRHERFHTGE----------------------------------KPY-------- 161

  Fly   232 TVGGNNQSLLCTECGVSYSTQKALARHVAKHKEQGDTQKPHLCDFCGRGFRTNAQLTTHRRRHTG 296
                     .|.:|..::|....|..|...|    ..:||:.|:.|.:.|..::.|.||||.|||
Mouse   162 ---------KCNQCDKAFSQYNNLQTHRRTH----TGEKPYKCNQCDKAFSQHSTLQTHRRTHTG 213

  Fly   297 ERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHKCPQCDKTFYTRGNLRAHIQRHTGERPYKCPDC 361
            |:||||..|.||::...:|::|..||..||.:||.||||.|....:|..|.:.||||:|.||.:|
Mouse   214 EKPFKCNQCDKAFSEKCSLQTHRRTHTGEKPYKCNQCDKAFSQYSHLHIHRRTHTGEKPLKCNEC 278

  Fly   362 PQTFAKNSGLKLHSRLHKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSN 426
            .:||:.:|.|:.|.|:|..|:|:||..|.|.|.|:..|..|.|.|.|::.|||..|||:|...|.
Mouse   279 DETFSNHSNLQTHRRIHTGEKPYKCNQCDKAFSQHSTLQNHRRTHTGEKPFKCNQCDKAFSRHST 343

  Fly   427 MMKHQRTHSGIKPFKCEECGQAFSHNHHLKSHLRIHTGEKPYKCDQCGKGFSANQSLMKHTLWHV 491
            :..|:|||:|.|||||.:|.:|||...||..|.|.||||||:||:||.|.||....|..|...| 
Mouse   344 LQTHRRTHTGEKPFKCNQCDKAFSQYSHLHIHRRTHTGEKPFKCNQCNKAFSQYSHLHIHRRTH- 407

  Fly   492 DNNDRPFKCSQCPKAYDTQQSLRGHEKTHKNPDEPKTLHQCPHCDVRFALKKTLDKHITSHK-IR 555
             ..::|:||:||.|.:....:|:.|.:||.. ::|   ::|..||..|:...||..|..:|. .:
Mouse   408 -TGEKPYKCNQCDKTFSNHSTLQTHRRTHTG-EKP---YKCNQCDKAFSRHSTLQTHRRTHTGEK 467

  Fly   556 PHPCPQCPEGFFSQKSLKKHLRLHNLKK 583
            |..|.||.:.|..:.||:||:|:|..:|
Mouse   468 PFKCNQCDKAFSQKCSLQKHIRIHTGEK 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 20..95 CDD:462262 13/52 (25%)
C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 274..294 CDD:275368 8/19 (42%)
SFP1 <296..374 CDD:227516 36/77 (47%)
COG5048 <299..486 CDD:227381 90/186 (48%)
C2H2 Zn finger 302..322 CDD:275368 6/19 (32%)
C2H2 Zn finger 330..350 CDD:275368 8/19 (42%)
C2H2 Zn finger 358..378 CDD:275368 8/19 (42%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
COG5048 <395..583 CDD:227381 78/188 (41%)
C2H2 Zn finger 414..434 CDD:275368 8/19 (42%)
C2H2 Zn finger 442..462 CDD:275368 9/19 (47%)
C2H2 Zn finger 470..486 CDD:275368 7/15 (47%)
C2H2 Zn finger 500..520 CDD:275368 6/19 (32%)
C2H2 Zn finger 532..552 CDD:275370 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275370 9/19 (47%)
Gm3604NP_001156382.1 KRAB 4..44 CDD:460171
C2H2 Zn finger 81..99 CDD:275368 5/17 (29%)
COG5048 130..558 CDD:227381 147/427 (34%)
C2H2 Zn finger 135..155 CDD:275368 1/19 (5%)
C2H2 Zn finger 163..183 CDD:275368 5/19 (26%)
C2H2 Zn finger 191..211 CDD:275368 8/19 (42%)
C2H2 Zn finger 219..239 CDD:275368 6/19 (32%)
C2H2 Zn finger 247..267 CDD:275368 8/19 (42%)
C2H2 Zn finger 275..295 CDD:275368 8/19 (42%)
C2H2 Zn finger 303..323 CDD:275368 8/19 (42%)
C2H2 Zn finger 331..351 CDD:275368 8/19 (42%)
C2H2 Zn finger 359..379 CDD:275368 9/19 (47%)
C2H2 Zn finger 387..407 CDD:275368 8/19 (42%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
C2H2 Zn finger 443..463 CDD:275368 7/19 (37%)
C2H2 Zn finger 471..491 CDD:275368 9/19 (47%)
C2H2 Zn finger 499..519 CDD:275368
C2H2 Zn finger 527..547 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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