DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and znf1046

DIOPT Version :10

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_017210830.2 Gene:znf1046 / 100004513 ZFINID:ZDB-GENE-030131-2092 Length:435 Species:Danio rerio


Alignment Length:430 Identity:149/430 - (34%)
Similarity:218/430 - (50%) Gaps:31/430 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 QESE--PLQEVFEITMNDIKTEDEVSI--QETFED-AFDEENDNNNTDSEREDSDQWTVGSTEDQ 219
            :|||  .::|.|.:...|::.:.::.:  :||.:. ..||:...........|........|...
Zfish    23 EESEDVKIEETFTVKQEDLQEQTDLMVLKEETHQQIEIDEKQQFEKPQEIATDEKPTLTKKTSSH 87

  Fly   220 DEPWIPGGGGRQTVGGNNQSLLCTECGVSYSTQKALARHVAKHKEQGDTQKPHLCDFCGRGFRTN 284
            ..|       |::..|.|.|  |.:|..|:|.:..|..|:..|..    ::|..|:.||:.|...
Zfish    88 GRP-------RKSKSGCNFS--CKQCRKSFSQKSKLDVHMRVHTR----EQPFTCEQCGKSFGQI 139

  Fly   285 AQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHKCPQCDKTFYTRGNLRAHIQR 349
            .....|.|.|||||.|.|..|.|::.|.....:||..|..||...|.||.|:|..:.||..|.:.
Zfish   140 QGFKAHMRIHTGERKFTCRKCEKSFYHAGHFAAHMRIHTGEKPFSCKQCGKSFCQKPNLDDHKRV 204

  Fly   350 HTGERPYKCPDCPQTFAKNSGLKLHSRLHKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKC 414
            ||||:||.|..|.::|::....|.|.|:|..|||:.|:.|||.|....:|..|:|.|.|::.|.|
Zfish   205 HTGEKPYTCEQCGKSFSQKQNFKTHMRIHTGERPYTCQKCGKSFRHAINLEVHMRTHTGEKPFSC 269

  Fly   415 PDCDKSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSHLRIHTGEKPYKCDQCGKGFSA 479
            ..|.|||.:|.|::.|.|.|:..||..||:||::||....|..|:|||||||||.|.:||||||.
Zfish   270 KQCRKSFSKKPNLIAHMRVHTREKPHTCEQCGKSFSQKRDLYIHMRIHTGEKPYTCTECGKGFSH 334

  Fly   480 NQSLMKHTLWHVDNNDRPFKCSQCPKAYDTQQSLRGHEKTHKNPDEPKTLHQCPHCDVRFALKKT 544
            ..:|..|...|  ..::||.|:||.|::.|:.||:.|...|..    ..:..|..|......|.|
Zfish   335 ISTLKHHMRTH--TGEKPFACAQCGKSFTTKPSLKNHMNGHTG----TIVFTCDQCGKSLTRKDT 393

  Fly   545 LDKHITSH----KIRPHPCPQCPEGFFSQKSLKKHLRLHN 580
            :.||:..|    :.|   |.:|.:||.|::||..|:::||
Zfish   394 IKKHMKIHSREDRFR---CCECGKGFKSKRSLNTHMKIHN 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 20..95 CDD:462262
C2H2 Zn finger 242..262 CDD:275368 6/19 (32%)
C2H2 Zn finger 274..294 CDD:275368 6/19 (32%)
SFP1 <296..374 CDD:227516 31/77 (40%)
COG5048 <299..486 CDD:227381 82/186 (44%)
C2H2 Zn finger 302..322 CDD:275368 6/19 (32%)
C2H2 Zn finger 330..350 CDD:275368 8/19 (42%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
COG5048 <395..583 CDD:227381 74/190 (39%)
C2H2 Zn finger 414..434 CDD:275368 9/19 (47%)
C2H2 Zn finger 442..462 CDD:275368 9/19 (47%)
C2H2 Zn finger 470..486 CDD:275368 8/15 (53%)
C2H2 Zn finger 500..520 CDD:275368 8/19 (42%)
C2H2 Zn finger 532..552 CDD:275370 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275370 8/19 (42%)
znf1046XP_017210830.2 C2H2 Zn finger 101..121 CDD:275368 6/19 (32%)
C2H2 Zn finger 129..149 CDD:275368 6/19 (32%)
C2H2 Zn finger 157..177 CDD:275368 6/19 (32%)
zf-H2C2_2 173..192 CDD:463886 9/18 (50%)
C2H2 Zn finger 185..205 CDD:275368 8/19 (42%)
COG5048 <209..360 CDD:227381 68/152 (45%)
C2H2 Zn finger 213..233 CDD:275368 6/19 (32%)
C2H2 Zn finger 241..261 CDD:275368 8/19 (42%)
C2H2 Zn finger 269..289 CDD:275368 9/19 (47%)
C2H2 Zn finger 297..317 CDD:275368 9/19 (47%)
C2H2 Zn finger 325..345 CDD:275368 9/19 (47%)
C2H2 Zn finger 353..373 CDD:275368 8/19 (42%)
C2H2 Zn finger 409..429 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

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