DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32137 and Lamb1

DIOPT Version :9

Sequence 1:NP_729935.1 Gene:CG32137 / 39537 FlyBaseID:FBgn0052137 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_032508.3 Gene:Lamb1 / 16777 MGIID:96743 Length:1786 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32137NP_729935.1 DUF4337 <105..>172 CDD:290935
Lamb1NP_032508.3 Laminin_N 44..269 CDD:365840
EGF_Lam 271..323 CDD:238012
EGF_Lam 335..387 CDD:238012
Laminin_EGF 398..455 CDD:365839
Laminin_EGF 458..512 CDD:365839
EGF_Lam 509..>548 CDD:238012
EGF_Lam 773..818 CDD:214543
Laminin_EGF 821..869 CDD:365839
EGF_Lam 866..911 CDD:238012
Laminin_EGF 917..973 CDD:365839
Laminin_EGF 976..1025 CDD:365839
Laminin_EGF 1028..1082 CDD:365839
Laminin_EGF 1084..1132 CDD:365839
Laminin_EGF 1132..>1171 CDD:365839
Domain II 1179..1397
SCP-1 <1201..1667 CDD:114219
Domain alpha 1398..1430
Domain I 1431..1786
SMC_prok_B 1456..>1776 CDD:274008
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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