DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCTN1-p150 and NIP100

DIOPT Version :9

Sequence 1:NP_524061.1 Gene:DCTN1-p150 / 39536 FlyBaseID:FBgn0001108 Length:1265 Species:Drosophila melanogaster
Sequence 2:NP_015151.1 Gene:NIP100 / 855929 SGDID:S000006095 Length:868 Species:Saccharomyces cerevisiae


Alignment Length:1168 Identity:216/1168 - (18%)
Similarity:387/1168 - (33%) Gaps:419/1168 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVGARVELTGKDLLGTVAYVGMTSFAVGKWVGVVLDEPKGKNSGSIKGQQYFQCDENCGMFVRPT 71
            |:..:..:...::.|.|.::|.|.||.|.|.|:.||:|.|||.||..|.:||..|          
Yeast    14 KISLQDTVLVNEMKGRVKFIGETQFAKGIWYGIELDKPLGKNDGSANGIRYFDID---------- 68

  Fly    72 QLRLLEAAPGSRRSIEDVSGATPTAAQPTKARLSSSRTSLSSSRQSLLGSRTQLTTSLSERTASS 136
                                                                             
Yeast    69 ----------------------------------------------------------------- 68

  Fly   137 SSIGPRKSLAPQNSKDKESPSTSLAEGAPAASGGNGAASHASSKRASFVETGFLEILKPQFTPSQ 201
                    |...||                 :||         ....|.:...|:..||.     
Yeast    69 --------LKKANS-----------------NGG---------YYGLFCKKDTLQFYKPD----- 94

  Fly   202 PLRSPSFTMPSNSGAEDKVALLE---AQKTSAELQAQLADLTEKLETLKQRRNEDKERLREFDKM 263
                           :|:.:||.   ||:|...||.:...|..||..:|...:|          :
Yeast    95 ---------------DDEHSLLNGNAAQETIKNLQVKCESLASKLNKIKIENHE----------L 134

  Fly   264 KIQFEQLQEFRTKIMGAQASLQKELLRAKQEAKDAIEAKEQHAQEMADLADNVEMITLDKEMAEE 328
            |...|:|....|.::...:.|.|.:...|.| ...::....:...:.|.:|:|....|||....|
Yeast   135 KTSVEKLSTNETVLLSKISRLDKLVKELKVE-NGNMKTHLDNFNHLLDASDSVMAPDLDKGTLLE 198

  Fly   329 KADTLQLELESSKERIEE-LEVDLELLRSEMQNKAESAIGNISGGGDSPGLSTYEFKQLEQQNIR 392
            ::..||..|:.:|...:: ::|..:||....|...|:|:                          
Yeast   199 RSHLLQGLLDQTKLSYDKAMKVQEDLLEENTQLLEENAV-------------------------- 237

  Fly   393 LKETLVRLRDLSAHDKHDIQKLSKELEMKRSEVTELERTKEKLSAKIDELEAIVADLQEQVDAAL 457
                                 |||::              ..|..::.:....:.||..|::|..
Yeast   238 ---------------------LSKKI--------------SDLGLQLQQTNNTIGDLALQIEAQS 267

  Fly   458 GAEEMVEQLAEKKMELEDKVKLLEEEIAQLEALEEVHEQLVESNHELELDLREELDLANGA---K 519
            .:..:|::|....:.|...:|.|..|:.:|:|.|::.|.|..:..:||.:||.:|.....|   :
Yeast   268 KSSNIVDKLTNDNILLTSNIKALNNELEELQAKEKLDENLRITYEQLEQELRLQLSNLQSALENE 332

  Fly   520 KEV----LRERD---AAIETIYDRDQTIVKFRELVQKLNDQLTELRDRNSSNEK-----ESLQDP 572
            ||:    :.|..   |.:|:|  ..:|..||:.|..|:|....||. :|...:|     |....|
Yeast   333 KEIAGTYIEENSRLKATLESI--EAKTSHKFQSLELKVNTLQEELY-QNKLLKKFYQIYEPFAQP 394

  Fly   573 SLKMVTETIDYKQMFAESKAYTRAIDVQLRQIELSQANEHVQMLTAFMPESFMSRGGDHDSILVI 637
            .|..::..:.|.....||:.:.:     |..||:     |:                      ::
Yeast   395 HLAALSSQLQYLAEVIESENFGK-----LENIEI-----HI----------------------IL 427

  Fly   638 LLISRIVFKCDIVVSQTRERFPPVDAITREAVTQGHAVQQYAFKCRLLHYVHSLQCALHQILYGL 702
            .::|.|                            .:|:..|..|....|...:|||....|. .:
Yeast   428 KVLSSI----------------------------SYALHIYTIKNTPDHLETTLQCFKVNIA-PI 463

  Fly   703 NSCQPDTLLRAGSSLPEMVAQEKIVDGIIELLKSNQ-LDENST----------TDNIEKCVAF-- 754
            :....:.|.|..||      :::....|.:.|:.|: ||::.|          ...:.|.:||  
Yeast   464 SMWLSEFLQRKFSS------KQETAFSICQFLEDNKFLDKDVTLILKILHPILETTVPKLLAFLR 522

  Fly   755 ----FNAMNSVLLAGEQLLNEIQMIRDCVASLGAACESILSDTAIAK-----VIIQEAGATSDSV 810
                ||..:::.|.|......:.:|        |..:.::....|:|     .:......|..|:
Yeast   523 TNSNFNDNDTLCLIGSLYERSLSLI--------ARIDKLIGKEEISKQDNRLFLYPSCDITLSSI 579

  Fly   811 LLIQFLNENMESVRQQVKLIKRRLPSDQHVIKSGLSQHKV--EAMRGLAQNISRIMSAMHQATKQ 873
            |.|.|  .:...:||..|.|            |.|.:.:|  :.:..|.:||:.......|.|  
Yeast   580 LTILF--SDALFLRQDYKRI------------SSLKKLEVFFQGIESLLENITIFPEQPSQQT-- 628

  Fly   874 SLAAIVSTIESDNAAEHTLPQEKYWALLTASCERIYEQDDRGPTQNFKTLLAQANSDLQ------ 932
                      ||:.::..:.:..:...|.:  :|:.|::.|     .|.:|.|..:.|.      
Yeast   629 ----------SDSESQCNIKEGNFSNSLLS--DRLNEENIR-----LKEVLVQKENMLTELETKI 676

  Fly   933 --LIAQHL----LDKEYDIISAANNASNQQKSGAHSTPITQRAQLIKKQLEQKNVLAATLENREA 991
              :|.:.|    |::....:....|..|::..|        :.:::.|..|:...|...|:|.|.
Yeast   677 KIIIGRDLERKTLEENIKTLKVELNNKNEENCG--------KTEILNKLKEENFNLVNRLKNMEL 733

  Fly   992 DVKQLKVAAKMKQ--------------NELSEMQ--IRKDLAEKK-----------LSVLQNE-- 1027
            .:.|:|....:.:              :|:.|::  ||:.:.|:|           |..::|:  
Yeast   734 KLYQIKDNNTLNKIYLDREKVDRVNLVSEIMELRETIRRQIKEQKRVSIDFSWLDELPAVENKQP 798

  Fly  1028 ----YEHAVDKW---KQKYEETSLQLQLK------EKEFEETMDHLQSDIDALESEKSDLRDK 1077
                ..|::|..   ...:..||..|.||      |.|.....||  |.|..|:.::.::|.|
Yeast   799 FKEHINHSLDTLGIEMFNFVSTSRILDLKLDQPLAEDELWHERDH--SYISYLKRKRKNIRLK 859

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCTN1-p150NP_524061.1 CAP_GLY 8..74 CDD:214997 21/65 (32%)
Dynactin 553..834 CDD:289240 54/307 (18%)
NIP100NP_015151.1 NIP100 12..828 CDD:227569 206/1133 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 58 1.000 Domainoid score I2622
eggNOG 1 0.900 - - E1_COG5244
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR18916
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1398
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.030

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