DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCTN1-p150 and Clip4

DIOPT Version :10

Sequence 1:NP_524061.1 Gene:DCTN1-p150 / 39536 FlyBaseID:FBgn0001108 Length:1265 Species:Drosophila melanogaster
Sequence 2:NP_084455.2 Gene:Clip4 / 78785 MGIID:1919100 Length:704 Species:Mus musculus


Alignment Length:450 Identity:107/450 - (23%)
Similarity:169/450 - (37%) Gaps:139/450 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEKNLKVGARVELTGKDLLGTVAYVGMTSFAVGKWVGVVLDEPKGKNSGSIKGQQYFQCDENCG 65
            ::...||:|.||.:.|:. :||:.:.|.|.||.|:|.|:.||||:|||:||:...|||:|....|
Mouse   278 LTSLGLKLGDRVVIAGQK-VGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGRVQYFKCAPKYG 341

  Fly    66 MFVRPTQLRLLEAAPGSRRS-IED---VSGATPTAAQPTKARLSSSRTSLSSSRQSLLGSRTQLT 126
            :|           ||.|:.| ::|   .:..||:......||......:..:||.:     :.||
Mouse   342 IF-----------APLSKISKLKDGRKTTTHTPSTRATPHARSQKVDVAHFTSRVN-----SGLT 390

  Fly   127 TSLSERTASSSSIGPRKSLAPQNSKDKESPSTSLAEGAPAASGGNGAASHASS--------KRAS 183
            ||..| |||.|::    :|.|     .|.|.| :||...|..|...::|.:||        |:.:
Mouse   391 TSKKE-TASESTL----TLPP-----SEEPKT-VAENDAAQPGSMSSSSSSSSLDHKQSYPKKLT 444

  Fly   184 FVETGFLEILKPQFTPSQP---LRSPSFTMPSNSGAEDKVALLEAQKTSAELQAQLADLTEKLET 245
            ....|...:.|....||:.   |:|.:.:..:||..|..:.|.|          ::..:.:::.|
Mouse   445 TSSGGKKTLSKSPSLPSRASAGLKSSATSAANNSHHEGALHLGE----------RVLVVGQRVGT 499

  Fly   246 LK-------------------------------------------------QRRNEDKERLREFD 261
            :|                                                 ||.::..:.|.|..
Mouse   500 IKFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSCSPRYGIFAPPSRVQRLSDSLDTLSEIS 564

  Fly   262 KMKIQFEQLQEFRTKIMGAQASLQKELLR--AKQEAKDAIEAKEQHAQEMADLADNVE------- 317
            ..| |......||.......||.|||:.|  |..:.|..:......:.....|...|:       
Mouse   565 SNK-QNHSYPGFRRSFSTTSASSQKEINRRNAFAKTKTTLRRSWSSSTTAGGLEGTVKLHEGSQV 628

  Fly   318 MITLDKEMAEEK---------ADTLQLELESSKERIEELEVDLELLRSEMQNKAESAIGN 368
            ::|...|||..:         ...|.|||.|:|                  .|.:.|:|:
Mouse   629 LLTSSNEMATVRYVGPTDFASGIWLGLELRSAK------------------GKNDGAVGD 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCTN1-p150NP_524061.1 CAP_GLY 8..73 CDD:460154 28/64 (44%)
NIP100 13..>272 CDD:227569 77/322 (24%)
SMC_prok_B <219..>497 CDD:274008 35/216 (16%)
Dynactin 550..834 CDD:463591
Smc <965..>1080 CDD:440809
Clip4NP_084455.2 ANK 1 65..101
ANKYR <84..254 CDD:440430
ANK repeat 109..144 CDD:293786
ANK 2 149..180
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK 3 186..215
CAP_GLY 285..349 CDD:460154 31/75 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 353..479 36/141 (26%)
CAP_GLY 486..550 CDD:460154 4/73 (5%)
CAP_GLY 625..689 CDD:460154 13/63 (21%)
Blue background indicates that the domain is not in the aligned region.

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