DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DCTN1-p150 and Khc-73

DIOPT Version :10

Sequence 1:NP_524061.1 Gene:DCTN1-p150 / 39536 FlyBaseID:FBgn0001108 Length:1265 Species:Drosophila melanogaster
Sequence 2:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster


Alignment Length:194 Identity:65/194 - (33%)
Similarity:82/194 - (42%) Gaps:33/194 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VGARVELTGKDLLGTVAYVGMTSFAVGKWVGVVLDEPKGKNSGSIKGQQYFQCDENCGMFVRPTQ 72
            ||..|.:...:..|.:.:||.|.|..|.|:||.||.|.|||.||:||.|||||....|||||..:
  Fly  1785 VGESVLIRPYNTSGVIRFVGTTEFQPGAWIGVELDTPTGKNDGSVKGVQYFQCKPKHGMFVRSDK 1849

  Fly    73 LRLLEAAPGSRRSIEDVSGATPTAAQPTKARLSSSRTSLSSSRQSLLGSRTQLTTSLSERTASSS 137
            |.|            |..|   .|.:..||...|:..|...| .|:.||.|:     |:....|.
  Fly  1850 LML------------DKRG---KAMRAYKAAEKSNSISKEMS-TSMTGSMTR-----SKSRGDSL 1893

  Fly   138 SIGPRKSLAPQNSKDKE-----SPSTSLAEGAP-------AASGGNGAASHASSKRASFVETGF 189
            ::..|| |.|:.|...:     ..||......|       |.||...|.||.....|:...|.|
  Fly  1894 NLSARKXLYPKCSHQLQRWTNCRQSTVATSSQPATCHRLRATSGAADANSHGKKCYANRRSTAF 1957

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCTN1-p150NP_524061.1 CAP_GLY 8..73 CDD:460154 32/64 (50%)
NIP100 13..>272 CDD:227569 62/189 (33%)
SMC_prok_B <219..>497 CDD:274008
Dynactin 550..834 CDD:463591
Smc <965..>1080 CDD:440809
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816
Kinesin_assoc 356..468 CDD:465047
FHA_KIF13 446..547 CDD:438758
KIF1B 741..786 CDD:463574
DUF3694 989..1243 CDD:463599
CAP_GLY 1785..1850 CDD:460154 32/64 (50%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.