DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCTN1-p150 and CLIP3

DIOPT Version :10

Sequence 1:NP_524061.1 Gene:DCTN1-p150 / 39536 FlyBaseID:FBgn0001108 Length:1265 Species:Drosophila melanogaster
Sequence 2:NP_056341.1 Gene:CLIP3 / 25999 HGNCID:24314 Length:547 Species:Homo sapiens


Alignment Length:268 Identity:71/268 - (26%)
Similarity:111/268 - (41%) Gaps:70/268 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEKNLKVGARVELTGKDLLGTVAYVGMTSFAVGKWVGVVLDEPKGKNSGSIKGQQYFQCDENCG 65
            :|...|::|.||.|.|:. .||:.:.|.|.||.|:||||.||||:|||.||:.|.:||.|....|
Human   289 LSALGLRLGDRVLLDGQK-TGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQG 352

  Fly    66 MFVRPTQL-RLLEAAPGSRRSIEDVSGATPTAAQPTKARLSSSRTSLSSSRQSLLGSRTQLTT-- 127
            :|...::: :.::|.|.|            ..:.|...|:..||.:....|:.....:|..:.  
Human   353 LFASVSKISKAVDAPPSS------------VTSTPRTPRMDFSRVTGKGRREHKGKKKTPSSPSL 405

  Fly   128 -SLSERTASSSSIGPRKSLAPQN-------SKDKESPS----------TSLAEG----------- 163
             ||.:|..:.:.:|.:..:|.|.       .|...:|.          |...:|           
Human   406 GSLQQRDGAKAEVGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCP 470

  Fly   164 ------APAAS----GGNGAASHASSKRASFVETGFLEILKPQFTPSQPLRSPSFT---MPSNSG 215
                  |||:.    ||: ..|...|..|..|.         |.|.:||.|  :||   .|.:..
Human   471 PRHGVFAPASRIQRIGGS-TDSPGDSVGAKKVH---------QVTMTQPKR--TFTTVRTPKDIA 523

  Fly   216 AEDKVALL 223
            :|:.::.|
Human   524 SENSISRL 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCTN1-p150NP_524061.1 CAP_GLY 8..73 CDD:460154 31/64 (48%)
NIP100 13..>272 CDD:227569 66/256 (26%)
SMC_prok_B <219..>497 CDD:274008 1/5 (20%)
Dynactin 550..834 CDD:463591
Smc <965..>1080 CDD:440809
CLIP3NP_056341.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
ANKYR <101..>235 CDD:440430
ANK 1 117..158
ANK repeat 120..157 CDD:293786
ANK repeat 159..190 CDD:293786
ANK 2 160..191
ANK 3 197..229
ANK repeat 198..228 CDD:293786
CAP_GLY 296..360 CDD:460154 31/64 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 365..413 12/59 (20%)
CAP_GLY 418..482 CDD:460154 10/63 (16%)
GoLD 488..547 14/56 (25%)
Blue background indicates that the domain is not in the aligned region.

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