DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCTN1-p150 and tbcb-1

DIOPT Version :9

Sequence 1:NP_524061.1 Gene:DCTN1-p150 / 39536 FlyBaseID:FBgn0001108 Length:1265 Species:Drosophila melanogaster
Sequence 2:NP_506367.1 Gene:tbcb-1 / 186176 WormBaseID:WBGene00009987 Length:229 Species:Caenorhabditis elegans


Alignment Length:75 Identity:39/75 - (52%)
Similarity:47/75 - (62%) Gaps:3/75 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KNLKVGARVELT-GKDLL--GTVAYVGMTSFAVGKWVGVVLDEPKGKNSGSIKGQQYFQCDENCG 65
            ||:.||.|.|:| |..:.  |.|||||.|.|..|.||||..|||.|||.||:.|.:||.||...|
 Worm   144 KNIMVGNRCEVTVGAQMARRGEVAYVGATKFKEGVWVGVKYDEPVGKNDGSVAGVRYFDCDPKYG 208

  Fly    66 MFVRPTQLRL 75
            .||||..:::
 Worm   209 GFVRPVDVKV 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCTN1-p150NP_524061.1 CAP_GLY 8..74 CDD:214997 37/68 (54%)
Dynactin 553..834 CDD:289240
tbcb-1NP_506367.1 Alp11_N 4..87 CDD:176384
CAP_GLY 149..216 CDD:279625 36/66 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1550378at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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