DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8833 and gpatch1

DIOPT Version :10

Sequence 1:NP_648669.1 Gene:CG8833 / 39535 FlyBaseID:FBgn0036386 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001191052.1 Gene:gpatch1 / 448925 ZFINID:ZDB-GENE-040914-65 Length:975 Species:Danio rerio


Alignment Length:1074 Identity:320/1074 - (29%)
Similarity:475/1074 - (44%) Gaps:269/1074 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DEEEHLHRFGTPLPALQKDVVPAKKPVAIEDQIVKDENGK-RRFHGAFTGGFSAGFWNTVGSLEG 65
            |.:|....:||||..|::| .|::||:.:.:|.||||.|: :|||||||||||||::|||||.||
Zfish     6 DSDEDFVTYGTPLEPLEED-EPSRKPIPVHEQTVKDEKGRYKRFHGAFTGGFSAGYFNTVGSKEG 69

  Fly    66 WTPQTFKSSRGERASSKAQLKPEDFMDQEDLGEFGIAPQGIRTRDEFANEDEQKQRSDQRRRKLM 130
            |||.||.||| ::.|.|...:||||||:||.||.||||:.|.|.||||:|     |.||.:.|..
Zfish    70 WTPSTFVSSR-QQKSEKHNARPEDFMDEEDFGEHGIAPREITTTDEFASE-----RKDQIKDKAR 128

  Fly   131 QPELGVGAIPGLP-VLEQLLRPVRDKVAVRILKSMGWKPGQGVGPRQTRKEKRQATARNSKEQYL 194
            ........|||.| :||:.:.|.|..:.|.:|:.||||.|||||||..||.::|.|.|       
Zfish   129 AVSSLAALIPGDPGLLEEFIAPARSSIGVELLRKMGWKDGQGVGPRLKRKPRKQNTGR------- 186

  Fly   195 MEHYGAEGLPSNKENKGEEDSNNEDED--DEDITFAPDDYEPIFYTPKENRFGMSYSGLNRDPIL 257
              .||. .||.|    |.|:|..:|::  .|::||||.|..|:.:|||.:..|:.|.|||....|
Zfish   187 --VYGC-SLPRN----GSEESEEDDDEFAPENVTFAPKDVVPVDFTPKVDSHGLGYRGLNPLQAL 244

  Fly   258 SKSSSSSAKPMQHI-----------NLFGEMEAQANKKQLSIRGQAFGVGAFEEEDEDIYARDDM 311
            ...|.|.     ||           ||||: .|...:::..|.||||||||.||||.|||.:|.|
Zfish   245 GGGSGSG-----HINLFTLQSDRTTNLFGD-RASGQERRGGIAGQAFGVGAMEEEDGDIYHKDSM 303

  Fly   312 TRYDFSLADKKPKQ------KKQQHVQQRH-----------VIDGFSEDNSPAVLQRPY-AIDLP 358
            :.||..|..::|..      ..||:.::::           ::|||:..:....::..| ..|||
Zfish   304 SNYDNVLGGEEPGDGLYGWTAPQQYTKKKNALKRVMAYSGRILDGFALASEVTEIKTVYPPPDLP 368

  Fly   359 RDFQPRNWLQ---RRSRFAP-----MDKERAQKLETASEYKRSGLGRHDLNPDQRAQILGEQQQE 415
            |||:|.::.:   ..|..:|     :...|.|..:.||:.     |||.|:..||..:|||...:
Zfish   369 RDFRPVHYFRPVIDPSTVSPIVAQALQLSRGQLSQDASQQ-----GRHKLDSTQRRDMLGESALQ 428

  Fly   416 --------------------EKTAEEQPKRNPFKDHSKSLMERINARTEGFTKGGVITENGEEQQ 460
                                .|.||.|   .|.:.:..|.::|.........|...:    :...
Zfish   429 GPSSVFELLESKDRERLTEIRKAAESQ---KPSESNLSSAVDRAVVVASAKAKAAAL----QALS 486

  Fly   461 TELAKEVKEANAAIQERAALKTKDLPSAMNSSSAFKPFIADEAKQLRYEKFVSSKLTDDKEITEF 525
            :.......:.....:.:.||.....|:| ::|..||||..:..||.||:.::|.....||:..| 
Zfish   487 SRFQSSSTQPQPPSETQMALNAWSGPTA-DASKTFKPFSKNPQKQARYDLYISKLKQGDKDAVE- 549

  Fly   526 LARMQPVTLSL------WDREMEKKEFIQAAKIYRPLVGLMNDRFV----SEANVQAEKVEQQEK 580
                    |||      |:|..|::||::||.:|:|....::.||.    .|.....:..::||.
Zfish   550 --------LSLDSSMTEWERGREREEFVRAALLYKPSSSSLSSRFTHGKHEEDTDTVDVAQEQEN 606

  Fly   581 PPEERKIVME--------RTKTMWKPTALLCKRYNIAEPFGGAMLEPEKELKAKAKISVFDYLET 637
            ..::::..::        |....|.|..|||||:||.:|:.|:.:....::| :.|.|||::|..
Zfish   607 DVDDKQAAVKMKMFGKLTRDTFEWHPDKLLCKRFNIPDPYPGSSMVGMPKVK-RDKYSVFNFLTI 670

  Fly   638 SVNTKANFETP----SIFPK--------------HIEKSIPEKV------ETPPSPPPAPQPEAE 678
            ...::.|...|    |..|:              .::.|.|:..      ||........|.|||
Zfish   671 PDGSQVNPSDPKPSSSTIPRVTAEASSKKSRWDVPVQASEPKDAVSAFLSETRSEVSATQQTEAE 735

  Fly   679 IQDKPNTKEEPSKHTFVPKTPLEQAV-----------DESRNKPISEKVDLFKSIFEDSDEEETE 732
            :  |..|...|:..|  .:..:.|:|           :|...:.:...:||||:||..|.:|::.
Zfish   736 V--KTQTDALPASAT--SEVKVAQSVEKQSDQKNEEEEEEEEEEVRPSMDLFKAIFASSSDEKSS 796

  Fly   733 LSEQDKLAILQESFGLPVTSTTSAAAQNVLRNTSPPRGIFASLFSPKIKDAAKEPAPTKFGP--- 794
            .|.:|: |..:|....|   |:.||.......|..|                  |.|.:|.|   
Zfish   797 SSSEDE-AEEEEELAPP---TSEAAQSTTTSGTVIP------------------PIPAQFTPAPD 839

  Fly   795 ----IEGSKLKIAYKPRKERLRNDREL-----AMAEVAPEDIYGPKLPTAPPQ-KPAAPEIQAEA 849
                ::...|.:...|..|......:.     |.::...|:.:||:||  ||. .|:.       
Zfish   840 INKAMDLKHLTVQSVPSAETTAQSTQSSLNAPAKSQGLDEEEFGPRLP--PPGFVPST------- 895

  Fly   850 NIDDRLQQLWQQHAPKKRKAEKWVEKKCISGSEDSDASSSNESSSSDSSDDNDKRSKLSKPKKSH 914
                        |:|:.:|.:|                                     |.|:.|
Zfish   896 ------------HSPQMKKQKK-------------------------------------KDKEKH 911

  Fly   915 KGSSSKKSKKSKLKSKKKSKKSEESKHKAKKKKK 948
            ||...||.||     ||||||   .|||.|:||:
Zfish   912 KGKKHKKEKK-----KKKSKK---HKHKGKQKKR 937

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8833NP_648669.1 DUF1604 27..112 CDD:462241 54/85 (64%)
G-patch 154..201 CDD:396249 20/46 (43%)
gpatch1NP_001191052.1 DUF1604 30..115 CDD:462241 54/85 (64%)
G-patch 153..>187 CDD:396249 18/42 (43%)

Return to query results.
Submit another query.