DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dysc and CYTIP

DIOPT Version :9

Sequence 1:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_004279.3 Gene:CYTIP / 9595 HGNCID:9506 Length:359 Species:Homo sapiens


Alignment Length:170 Identity:43/170 - (25%)
Similarity:68/170 - (40%) Gaps:39/170 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 HYSNGGTRDRDRTGRRSPASSPPST-THQIYRDRERERDRSVPNIHEL--------TTRTVSMSR 301
            |.|||...|    ....||.|..|| |..:..|..|........:..|        .||:.|:|.
Human     9 HSSNGNLAD----FCAGPAYSSYSTLTGSLTMDDNRRIQMLADTVATLPRGRKQLALTRSSSLSD 69

  Fly   302 -----------DQQIDHGFGICVKGGK-------DSGLGVYISRIEENSVAERAGLRPGDTILEV 348
                       ::|.:..||..::..:       .|.:...|.:|:|:|.|..|||:.||.:..:
Human    70 FSWSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANI 134

  Fly   349 NGTPFTSINHEEALKRCVQILKSSRQISMTVRAPPTLNST 388
            ||.......:    |:.|.:::||..: :|:.   |||.|
Human   135 NGVSTEGFTY----KQVVDLIRSSGNL-LTIE---TLNGT 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 25/103 (24%)
PDZ_signaling 466..543 CDD:238492
HN_L-whirlin_R2_like 573..653 CDD:259823
PDZ_signaling 886..971 CDD:238492
CYTIPNP_004279.3 PDZ_signaling 76..161 CDD:238492 21/89 (24%)
Interaction with CYTH1 166..188 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.