DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dysc and Pard3

DIOPT Version :9

Sequence 1:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster
Sequence 2:XP_006531583.1 Gene:Pard3 / 93742 MGIID:2135608 Length:1337 Species:Mus musculus


Alignment Length:1417 Identity:262/1417 - (18%)
Similarity:436/1417 - (30%) Gaps:457/1417 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PSMGGTQSSSSVPTGGSAGLSGHHLRSSGAPGPSSFEAEDIGMAFGMISPPPGSGPYVGSSAAAG 120
            |..||..:|:|               |:|...|..|                             
Mouse    84 PHHGGDGTSAS---------------STGTQSPEIF----------------------------- 104

  Fly   121 GSRVG-NSTSSLRGAGGRSGLYYSPPGTSYTIVERPHSPHYYFNSAGVPTKGGSLPGRGSAYLSS 184
            ||.:| |:.|:.:.....|.:..:|.      |.|.:.|.:...|:.....|.|.....:.:.|.
Mouse   105 GSELGTNNVSAFQPYQATSEIEVTPS------VLRANMPLHVRRSSDPALTGLSTSVSDNNFSSE 163

  Fly   185 SPASHMA---AGTAGTLPTSTAASGRSMGQHASSNGNKKRPISPEQVLRMFGATQSSSVPTSSYH 246
            .|:....   :.|||.|..:||.|.::..:....|                    ..|:|.....
Mouse   164 EPSRKNPTRWSTTAGFLKQNTAGSPKTCDRKKDEN--------------------YRSLPRDPSS 208

  Fly   247 YSNGGTRDRDRTGRRSPASSPPSTTHQIYRDR------ERERDRSVPNIHELT--TRTVSMSRDQ 303
            :||...||   ..|.|.::|.|.....:.:..      |.:..|..|..|..|  ....:.|.|.
Mouse   209 WSNQFQRD---NARSSLSASHPMVDRWLEKQEQDEEGTEEDSSRVEPVGHADTGLENMPNFSLDD 270

  Fly   304 QI-------DHG-FGICV-----KGGKDSGLGVYISRIEENSVAERAGL-RPGDTILEVNGTPFT 354
            .:       |.| .||.|     :||:.  ||:.:.|:|:...||:..| ...|.|:.:|.....
Mouse   271 MVKLVQVPNDGGPLGIHVVPFSARGGRT--LGLLVKRLEKGGKAEQENLFHENDCIVRINDGDLR 333

  Fly   355 SINHEEALKRCVQILKSS---------------RQISMTVRAPPTLNSTAPLHGFGPPSRDPMYA 404
            :...|:|.....|.:::.               .|:|...:     |:.:| ..|.|.|......
Mouse   334 NRRFEQAQHMFRQAMRARVIWFHVVPAANKEQYEQLSQREK-----NNYSP-GRFSPDSHCVANR 392

  Fly   405 SMAPPLHPQNQAAAAAAAAAASGAGLPFRQTCSWMDRHGR-----------PASPPMEYGGRRSE 458
            |:|      |.|..|...|..      ..|....:|.|.|           ||:|.:   ...|.
Mouse   393 SVA------NNAPQALPRAPR------LSQPPEQLDAHPRLPHSAHASTKPPAAPAL---APPSV 442

  Fly   459 RRDRIRRVELLIEPGQSLGLMIRGGVEYGLGIFVTGVD----------------KDSVADRSGLM 507
            ....:..|....:.|:.|.:.::.|.| |||..:|..|                :.:......|.
Mouse   443 LSTNVGSVYNTKKVGKRLNIQLKKGTE-GLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLK 506

  Fly   508 IGDEILEVNGQSFLDVTHDEAVGQLKYHK---RMSLVIRDVGKVPHSCTSIEMEPWDAYSPTGTR 569
            .||.::||||......:.:|.|..|:..|   .:||::....:..|. ..:..||....:|..|:
Mouse   507 AGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEEAFHP-REMNAEPSQMQTPKETK 570

  Fly   570 ARRKGQIATMVEEKARSLL----------------------PRHHFASLSYYI--------AEYS 604
            |..:..:.|  .:..|..|                      .:.:.|.|..::        |...
Mouse   571 AEDEDVVLT--PDGTREFLTFEVPLNDSGSAGLGVSVKGNRSKENHADLGIFVKSIINGGAASKD 633

  Fly   605 AKAMTIDAFVAV----LL-----EMLDTYEKHTLVTE-----IRELVFPEDRTRYDELVYRRERD 655
            .:....|..:||    ||     |.::|. :.::.||     :.:|:.....:|.:||       
Mouse   634 GRLRVNDQLIAVNGESLLGKANQEAMETL-RRSMSTEGNKRGMIQLIVARRISRCNEL------- 690

  Fly   656 PYSVDRHRRKGDPAR-DLPVTA--DDLEI---------IAATGRSPSSDSGLGMTVTDIYK---R 705
                   |..|.||. :||:..  ||.|.         |.....||:.::.|...:.:..|   .
Mouse   691 -------RSPGSPAAPELPIETELDDRERRISHSLYSGIEGLDESPTRNAALSRIMGESGKCQLS 748

  Fly   706 PALQLPH----------RPMSAGPILHRSQPASHYQTG--------------SNQSSSSLSPPQQ 746
            |.:.:||          .|:....:..:|..:||...|              |:.:..||||   
Mouse   749 PTVNMPHDDTVMIEDDRLPVLPPHLSDQSSSSSHDDVGFIMTEAGTWAKATISDSADCSLSP--- 810

  Fly   747 QQQQQQHYQPHHASLRHLGGIGGNVGSGRHHHHPLGPSQLKFRQTKDNQQQEYG-CDEHRTRRGS 810
                  ...|..|..|.  |.|....|.:........|||.|.:|:.::..:.| .||       
Mouse   811 ------DVDPVLAFQRE--GFGRQSMSEKRTKQFSDASQLDFVKTRKSKSMDLGIADE------- 860

  Fly   811 ETLLPEYEPDAEQELATKLSRSFDMK-----EEGGTLLGDKGVRRHQSMQRLSAE--QNGGSTTE 868
                            |||:...|.:     .:.|..||.|.....:|:|...||  .||.    
Mouse   861 ----------------TKLNTVDDQRAGSPSRDVGPSLGLKKSSSLESLQTAVAEVTLNGN---- 905

  Fly   869 QTHEHNPNVVPDHRGNLHITVKKTKPILGIAIEGGANTKHPLPRIINIHENGAAFEAG------- 926
                     :|.||                          |.||||.......:|.|.       
Mouse   906 ---------IPFHR--------------------------PRPRIIRGRGCNESFRAAIDKSYDK 935

  Fly   927 --------GLEVGQLILEVDGTKVEGLHHQEVA--------RLIAECFANREKAEITFLVVEA-- 973
                    |:|.    ||.|..:......:.|:        .|..:...:.||.:.|....:.  
Mouse   936 PMVDDDDEGMET----LEEDTEESSRSGRESVSTSSDQPSYSLERQMNGDPEKRDKTERKKDKAG 996

  Fly   974 --KKSNLEPKPTALIFLEAXHLLALPASDPLERQK-----LEFLYEWGIDLTETPKPMPTPIPLT 1031
              ||.:.|.:                 .|.|:.:|     |..::.:|                 
Mouse   997 KDKKKDREKE-----------------KDKLKAKKGMLKGLGDMFRFG----------------- 1027

  Fly  1032 KAKNPPPLPHELHNNINSQYGSSAALSNHQPHQH-----THPHPQQQQQQQQHSNT----KTPNT 1087
            |.:....:.......|...:.|.......:..|.     |....::|.:::.::..    :|...
Mouse  1028 KHRKDDKMEKMGRIKIQDSFTSEEDRVRMKEEQERIQAKTREFRERQARERDYAEIQDFHRTFGC 1092

  Fly  1088 NSNKTQGTPTTGTGA-ATTGSKQQQQPGNTTNT---PTKASREATPTREQHHQHATPTREHQQQT 1148
            :.....|..::..|. |.....|..:.|:..:|   ..|..|.:.|            .:..:.|
Mouse  1093 DDELLYGGMSSYEGCLALNARPQSPREGHLMDTLYAQVKKPRSSKP------------GDSNRST 1145

  Fly  1149 PTRQQQLQREQQQQLQREQQQQHHRDRQQHFR-EQREQREREYQHEHEH------EQHHHHHHHR 1206
            |:...::|| .:|:.|:.:|.:...||::.:. ||.....|.......|      :........|
Mouse  1146 PSNHDRIQR-LRQEFQQAKQDEDVEDRRRTYSFEQSWSSSRPASQSGRHSVSVEVQVQRQRQEER 1209

  Fly  1207 EHHEQHQHQHGHQHHPQHQHHHQYSSQQQHQRYSSSNSYKSHNN----SVYQ 1254
            |..:|.|.|:........::....|.....|.|:....::|...    |.||
Mouse  1210 ESFQQAQRQYSSLPRQSRKNASSISQDSWEQNYAPGEGFQSAKENPRYSSYQ 1261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 24/114 (21%)
PDZ_signaling 466..543 CDD:238492 23/95 (24%)
HN_L-whirlin_R2_like 573..653 CDD:259823 19/123 (15%)
PDZ_signaling 886..971 CDD:238492 17/107 (16%)
Pard3XP_006531583.1 DUF3534 2..83 CDD:338230
PDZ_signaling 272..347 CDD:238492 19/76 (25%)
PDZ_signaling 465..544 CDD:238492 20/79 (25%)
PDZ_signaling 588..681 CDD:238492 13/93 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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