DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dysc and Pdzd2

DIOPT Version :9

Sequence 1:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_001074533.1 Gene:Pdzd2 / 68070 MGIID:1922394 Length:2796 Species:Mus musculus


Alignment Length:1067 Identity:221/1067 - (20%)
Similarity:321/1067 - (30%) Gaps:363/1067 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 AAGTAGTLPTSTAASGRSMGQHASSNGNKKRPISPEQ-------VLRMFGATQ--SSSVPTSSYH 246
            :|...||:..|  ...:.:|....|.||...  ||:|       ..|:.|...  .|....:...
Mouse   464 SAAVRGTMLGS--EESQDVGSSEESKGNNLE--SPKQGNSKMKLKSRLSGGVHRLESVEEYNELM 524

  Fly   247 YSNGGTRDR----DRTGRRS--PASSPPSTTHQIYRDRERERDRSVPNIH-ELTTRTVSMS---- 300
            ..||..|.|    .|.||:.  |.....:.|.|.|. ..::..||:...| |...|.:..|    
Mouse   525 VRNGDPRIRMLEVSRDGRKHSLPQLLDSTGTSQEYH-IVKKSTRSLSTTHVESPWRLIRPSVISI 588

  Fly   301 --RDQQIDHGFGICVKGGKD---SGLGVYISRIEEN-SVAERAGLRPGDTILEVNGTPFTSINHE 359
              ..::...|.|..:.||:|   ..:|:::..|..| |.||...|:.||.||:|||.|...:..:
Mouse   589 IGLYKEKGKGLGFSIAGGRDCVRGQMGIFVKTIFPNGSAAEDGRLKEGDEILDVNGIPIKGLTFQ 653

  Fly   360 EALKRCVQILKSSRQISMTVR----APPTLNSTAPLHGFGPPSRDPMYASMAPPLHPQNQAAAAA 420
            ||:....||  .|....:|||    :|.....:.|.|         |..|.:|..:....|.|..
Mouse   654 EAIHTFKQI--RSGLFVLTVRTKLLSPSLTPCSTPTH---------MSRSSSPSFNSSGGAPAGG 707

  Fly   421 AAAAASGAGLPFRQTCSWMDRHGRPASPPMEYGGRRSERRDRI-RRVELLIEPGQSLGLMIRGGV 484
            .......|.|            ||.|..|          :||| ..|.|..||...||:   |..
Mouse   708 GQDEGGSASL------------GRKAPGP----------KDRIVMEVTLNKEPRVGLGI---GAC 747

  Fly   485 EYGL-----GIFVTGVDKDSVAD-RSGLMIGDEILEVNGQSFLDVTHDEAVGQLKYHKRMSLVIR 543
            ...|     ||::..:...|||. .|.|..||:|||||.   ::|.|   ....|.|..:|    
Mouse   748 CLALENSPPGIYIHSLAPGSVAKMESNLSRGDQILEVNS---VNVRH---AALSKVHAILS---- 802

  Fly   544 DVGKVPHSCTSIEMEPWDAYSPTGTRARRKGQIATMVEEKARSLLPRHHFASLSYYIAEYSAKAM 608
                   .|            |.|               ..|.::.||....:|         ..
Mouse   803 -------KC------------PPG---------------PVRLVIGRHPNPKVS---------EQ 824

  Fly   609 TIDAFVAVLLEMLDTYEKHTLVTEIRELVFP---EDRTRYDELVYRRERDPYSVDRHRRKGDPAR 670
            .:|..:|     ..||::.........|..|   ....:.|.|:...|...|.|  |..:|. ..
Mouse   825 EMDEVIA-----RSTYQESKEANSSPSLGTPLKSPSLAKKDSLLSESELSQYFV--HDGQGS-LS 881

  Fly   671 DLPVTADDLEIIAATGRSPSSDSGLGMTVTDIYKRPALQLPHRPMSAGPILHRSQPASHYQTGSN 735
            |..|...:.|....:|...|.|..| :||                          |:::.:||..
Mouse   882 DFVVAGSEDEDHPGSGYETSEDGSL-LTV--------------------------PSAYRETGKA 919

  Fly   736 QSSSSLSPPQQQQQQQQHYQ---PHHASLRHLGGIGGNVGSGRHHHHPLGPSQLKFRQTKDNQQQ 797
            :::|.::...|:.....|.|   ...|||         .||.:...:||    |:.|:.:.....
Mouse   920 RANSLVTLGSQRGSGLLHKQVTVARQASL---------PGSPQVLRNPL----LRQRRVRCYDSN 971

  Fly   798 EYGCDEHRTRRGSETLLPEYEP---------DAEQELATKLSRSFDMKEEGGTLLGDKGVRRHQS 853
            :...||.....|....||...|         |....|||. |:|.|:.::      |:.:::...
Mouse   972 DGSDDEDFDGEGDCVSLPGVLPGPGRPLVQDDTRFALATS-SKSIDVNKQ------DERLQKPLV 1029

  Fly   854 MQRLSAEQNGGSTTEQTHEHNPNVVPDHRGNLHITVKKTKPILGIAIEGGANTKHP----LPRII 914
            .:..|....|.|...   ||                         :|.||.....|    ||..:
Mouse  1030 SKACSVPLLGSSLDS---EH-------------------------SIHGGTAGTPPKAASLPGSV 1066

  Fly   915 NIHENGAAFEAGGLEVGQLILEVDGTKVEGLHHQEVARLIAECFANREKAEITFLVVEAKKSNLE 979
            ...:||..        |....|:.|::                                      
Mouse  1067 ETPKNGPG--------GSRRKEMSGSR-------------------------------------- 1085

  Fly   980 PKPTALIFLEAXHLLALPASDPLERQKLEFLYEWGIDLTETPKPMPTPIPLTKAKNPPPLPHELH 1044
                               |.|    |||:         ..|....:|.......:||.....| 
Mouse  1086 -------------------SSP----KLEY---------RVPADTQSPRSPENGTSPPQKTENL- 1117

  Fly  1045 NNINSQYGSSAALSNHQPHQHTHPH----------------PQQQQQQQQHSNTKTP-------N 1086
                        :|.|:|.....||                |..|..:.|.|:.|.|       .
Mouse  1118 ------------VSRHKPVARISPHYKRSDAEEAPSETANGPCAQDLKVQASSVKDPVAGHQPGG 1170

  Fly  1087 TNSNKTQGTPTTGTGAATTGSKQQQQPGN-TTNTPTKASREATPTREQH--------HQH----- 1137
            |...:.:|.||.|..:..|.......|.: .|..||:..:.|.|....|        ..|     
Mouse  1171 TAEKELRGNPTPGDSSVPTNCGPASTPCHPNTGLPTENPQGAAPECGPHPGTGWDGSSDHPPSPG 1235

  Fly  1138 -ATPTREHQQQTP-TRQQQLQREQQQQ 1162
             :...|....:|| ..:|.||.|...|
Mouse  1236 KSREVRPDSSETPAVTEQVLQPESLSQ 1262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 28/95 (29%)
PDZ_signaling 466..543 CDD:238492 27/82 (33%)
HN_L-whirlin_R2_like 573..653 CDD:259823 12/82 (15%)
PDZ_signaling 886..971 CDD:238492 11/88 (13%)
Pdzd2NP_001074533.1 PDZ_signaling 335..416 CDD:238492
PDZ_signaling 591..672 CDD:238492 26/82 (32%)
PDZ_signaling 729..813 CDD:238492 31/130 (24%)
PHA03307 1050..>1355 CDD:223039 53/304 (17%)
PHA03247 <1197..1562 CDD:223021 16/66 (24%)
PDZ_signaling 2581..2663 CDD:238492
PDZ 2709..2791 CDD:214570
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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