DRSC/TRiP Functional Genomics Resources

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Protein Alignment dysc and Pdzk1

DIOPT Version :9

Sequence 1:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_113900.1 Gene:Pdzk1 / 65144 RGDID:70924 Length:523 Species:Rattus norvegicus


Alignment Length:638 Identity:127/638 - (19%)
Similarity:220/638 - (34%) Gaps:186/638 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 RTVSMSRDQQIDHGFGICVKGGKDSGLGVYISRIEENSVAERAGLRPGDTILEVNGTPFTSINHE 359
            |...:|:.:..::||.:.::...|   |..:..|||.|.||:|||..||.:|.:||   ..::.|
  Rat     8 RECKLSKKEGQNYGFFLRIEKDTD---GHLVRVIEEGSPAEKAGLLDGDRVLRING---VFVDKE 66

  Fly   360 EALKRCVQILKSSRQISMTV----RAPPTLNSTAPLHGFGPPSRDPMYASMAPPLHPQNQAAAAA 420
            |..:....:.||...:::.|    .....:.....|.......|:|......|.|          
  Rat    67 EHAQVVDLVRKSGNSVTLLVLDGDSYEKAVKHQVDLKELDQSPREPALNEKKPDL---------- 121

  Fly   421 AAAAASGAGLPFRQTCSWMDRHGRPASPPMEYGGRRSERRDRIRRVELLIEPGQSLGLMIRGGVE 485
                ....|:   :||         |.|.:.|                |::.|.|.|..:: .::
  Rat   122 ----GMNGGV---ETC---------AQPRLCY----------------LVKEGNSFGFSLK-TIQ 153

  Fly   486 YGLGIFVTGVDKDSVADRSGLMIGDEILEVNGQSFLDVTHDEAVGQL-KYHKRMSLVIRDVGKVP 549
            ...|:|:|.:....||.::|::..|.::||||::..:.:|:|.|.:: |...|:..::  |.|..
  Rat   154 GKKGVFLTDITPQGVAMKAGVLADDHLIEVNGENVENASHEEVVEKVTKSGSRIMFLL--VDKET 216

  Fly   550 HSCTSIEMEPWDAYSPTGTRARRKGQIATMVEEKARSLLPRHHFASLSYYI-------------- 600
            ..|.|.:..|:          :|:.....::..:.|.::.:.......:|:              
  Rat   217 ARCHSEQKTPF----------KRETASLKLLPHQPRVVVIKKGSNGYGFYLRAGPEQKGQIIKDI 271

  Fly   601 -----AEYSAKAMTIDAFVAVLLEMLDTYEKHTLVTEIRE-------LVFPE--DR----TRYDE 647
                 || :|.....|..|||..|.::..:..::|..||.       ||..:  ||    .|:..
  Rat   272 EPGSPAE-AAGLKNNDLVVAVNGESVEALDHDSVVEMIRNGGDQTTLLVLDKEADRIYSLARFSP 335

  Fly   648 LVYRRERDPYSVDRHRRKGDPARDLPVTADDLEIIAATGRSPSSDSGLGMTVTDIYKRPALQLPH 712
            |:|.:.::   :.....|..||   |::|.    :.|.|.:.:.|.|                .|
  Rat   336 LLYCQSQE---LPNGSVKEAPA---PISAP----LEAPGSATTEDVG----------------DH 374

  Fly   713 RPMSAGPILHRSQPASHYQTGSNQSSSSLSPPQQQQQQQQHYQPHHASLRHLGGIGGNVGSGRHH 777
            :|.....|........|......|..|.:...||                  ||.....|     
  Rat   375 KPKLCRLIKEDDSYGFHLNAIRGQPGSFVKEVQQ------------------GGPADKAG----- 416

  Fly   778 HHPLGPSQLKFRQTKDNQQQE-YGCDEHRTRRGSE--TLLPEYEPDAEQELATKLSRSFDMKEEG 839
               |....:......:|.|.| |.....|.:...|  |||          :..|::.|:...::.
  Rat   417 ---LENEDIIIEVNGENVQDEPYDRVVERIKSSGEHVTLL----------VCGKVAYSYFQAKKI 468

  Fly   840 GTL--LGD--------KGVRRHQSMQ------------RLSAEQNGGSTTEQT 870
            ..|  |.|        ||...|.|.:            .|||..:..|.:|.|
  Rat   469 PILSSLADPLVAGPDEKGETEHDSAESTKDSSHPARDRTLSAASHSSSNSEDT 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 25/88 (28%)
PDZ_signaling 466..543 CDD:238492 20/77 (26%)
HN_L-whirlin_R2_like 573..653 CDD:259823 20/111 (18%)
PDZ_signaling 886..971 CDD:238492
Pdzk1NP_113900.1 PDZ_signaling 7..87 CDD:238492 24/84 (29%)
PDZ 132..212 CDD:214570 22/98 (22%)
PDZ_signaling 242..320 CDD:238492 14/78 (18%)
PDZ 375..455 CDD:214570 20/115 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 479..523 10/43 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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