DRSC/TRiP Functional Genomics Resources

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Protein Alignment dysc and Synj2bp

DIOPT Version :9

Sequence 1:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_072121.2 Gene:Synj2bp / 64531 RGDID:69400 Length:145 Species:Rattus norvegicus


Alignment Length:109 Identity:35/109 - (32%)
Similarity:55/109 - (50%) Gaps:12/109 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 GFGICVKGGKD-----SGLGVYISRIEENSVAERAG-LRPGDTILEVNGTPFTSINHEEALKRCV 366
            |.|..:.||.|     :..|:|:|||:|:..|.|.| |:.||.||.|||....::.|::|    |
  Rat    22 GLGFNIVGGTDQQYVSNDSGIYVSRIKEDGAAARDGRLQEGDKILSVNGQDLKNLLHQDA----V 82

  Fly   367 QILKSS-RQISMTVR-APPTLNSTAPLHGFGPPSRDPMYASMAP 408
            .:.::: ..:|:.|: ..|..|......|.|.||..|:...:.|
  Rat    83 DLFRNAGYAVSLRVQHRLPVQNGPIVHRGDGEPSGVPVAVVLLP 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 26/78 (33%)
PDZ_signaling 466..543 CDD:238492
HN_L-whirlin_R2_like 573..653 CDD:259823
PDZ_signaling 886..971 CDD:238492
Synj2bpNP_072121.2 PDZ_signaling 13..97 CDD:238492 26/78 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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