DRSC/TRiP Functional Genomics Resources

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Protein Alignment dysc and lnx2a

DIOPT Version :9

Sequence 1:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_001106696.2 Gene:lnx2a / 553331 ZFINID:ZDB-GENE-060228-2 Length:737 Species:Danio rerio


Alignment Length:591 Identity:133/591 - (22%)
Similarity:194/591 - (32%) Gaps:188/591 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 GTQSSSSVPTGGSAGLSGHHLRSSGAPGPSSFEAEDIGMAFGM-ISPP----PGSGPYV-----G 114
            |:.:.::|||         .....|...|:..|:.:.....|: .:.|    |.|.|.:     |
Zfish   181 GSNACNNVPT---------WTEEPGIDNPAFEESTEEDSVHGLECALPRVKRPLSNPCIHLLRTG 236

  Fly   115 SSAAAGGSRVGNSTSSLRGAGGRSGLYYSPPGTSYTIVERPHSPHYYFNSAGVPTKGGSLPGRGS 179
            |||::|...|  .|..|....|...|...|.|...||.....:|   ::..|:...||       
Zfish   237 SSASSGWDFV--ETLPLSAEEGCVKLPSLPEGEITTIEVHRTNP---YSEMGISIVGG------- 289

  Fly   180 AYLSSSPASHMAAGTA---GTLPTSTAASGRSMG---------------QHASSNGNKKRPISPE 226
               :.:|..::.....   |.:    |..||.:.               .|..:.....||.:..
Zfish   290 ---NETPLINVVIQEVYRDGVI----ARDGRLLAGDQILQVNNVDISNVPHNFARSTLARPCATL 347

  Fly   227 QVLRMFGATQSSSVPTSSYHYSNGGTRDRDRTGRRSPASSPPS---TTHQIYRDRERERDRSVPN 288
            |:..:.....|:..|.::                .||..||.|   |.|:    ||......:  
Zfish   348 QLTVLRERRCSARPPAAT----------------ASPKGSPASIRITLHK----RESSEQLGI-- 390

  Fly   289 IHELTTRTVSMSRDQQIDHGFGICVKGGKDSGLGVYISRIEENSVAERAG-LRPGDTILEVN--- 349
              :|..||     |:                 .||:|..:.|..:|.:.| |...|.:|.||   
Zfish   391 --KLVRRT-----DE-----------------AGVFILDLLEGGLAAKDGRLCSNDRVLAVNEHD 431

  Fly   350 ---GTPFTSINHEEALKRCVQIL--KSSRQISMTVRAPPTLNSTAPLHGFGPPSRDPMYASMAPP 409
               |||..:....:|....|.:|  :||:| :|.|....||......|...||.......|..|.
Zfish   432 LRHGTPELAAQIIQASGERVNLLISRSSKQ-TMAVHTGSTLTRDIWSHDHIPPLPSTATPSPVPS 495

  Fly   410 LHPQNQAAAAAAAAAASGAGLPFRQTCSWMDRHGRPASPPMEYGGRRSERRDRIRRVELLIEPGQ 474
            ||           .|.|.......|..:..::|                       :.:..||.:
Zfish   496 LH-----------LARSSTQRDLSQCVNCKEKH-----------------------ITVKKEPHE 526

  Fly   475 SLGLMIRG--GVEYG-LGIFVTGVDKDSVADRSG-LMIGDEILEVNGQSFLDVTHDEAVGQLKYH 535
            |||:.:.|  |.:.| |.||||.|.......|.| :..||.:|.:|||....::|.||||.||  
Zfish   527 SLGMTVAGGRGSKSGELPIFVTSVQPHGCLSRDGRIKRGDVLLSINGQDLTYLSHSEAVGTLK-- 589

  Fly   536 KRMSLVIRDVGKVPHSCTSIEMEPWDAYSPTGTRARRKGQIATMVEEKA--RSLLPRHHFASLSY 598
                                       .|.|....:.|....|||||..  ..|||.|.    :.
Zfish   590 ---------------------------SSATSCSVQLKALEVTMVEEPGLDEELLPPHE----ND 623

  Fly   599 YIAEYS 604
            |.|.:|
Zfish   624 YDASWS 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 24/94 (26%)
PDZ_signaling 466..543 CDD:238492 29/80 (36%)
HN_L-whirlin_R2_like 573..653 CDD:259823 13/34 (38%)
PDZ_signaling 886..971 CDD:238492
lnx2aNP_001106696.2 zf-RING_2 49..87 CDD:290367
PDZ 267..353 CDD:214570 15/102 (15%)
PDZ_signaling 375..455 CDD:238492 24/109 (22%)
PDZ_signaling 515..600 CDD:238492 32/136 (24%)
PDZ_signaling 646..730 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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