DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dysc and Grip

DIOPT Version :9

Sequence 1:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster


Alignment Length:1116 Identity:206/1116 - (18%)
Similarity:320/1116 - (28%) Gaps:505/1116 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 AAAASFGLGPSMGGTQSSSSVPTGGSAGLSGHHLRSSGAPGPSSFEAEDIGMAFGMISPPP--GS 109
            |.:...||.|..|.|.::.::|.      :..||..:.|      |..|       :|.||  ||
  Fly    65 AQSEDSGLAPERGTTYATITLPR------NALHLAITFA------ERND-------LSYPPVVGS 110

  Fly   110 GPYVGSSA--AAGGSRV----GNSTSSLRG--------AGGRSG------LYYSPP--------- 145
            ...||.:|  .|.|.|:    |.||..|..        |||...      :.||.|         
  Fly   111 LNPVGHAADFLAPGDRLHQIDGISTIGLSNQKVMNMLCAGGSDACPAIVEIEYSLPECTVSQNSL 175

  Fly   146 ------------------------GTSYTIV---ERPHSPHYYFNSAGVPTKGGSLPGRGSAYLS 183
                                    |..|.::   .|||.|.|         |.|.:         
  Fly   176 CVTSKLAQITVERESGCLGLTLRGGADYPLIVTHVRPHGPVY---------KTGRI--------- 222

  Fly   184 SSPASHMAAGTAGTLPTSTAASGRSM---GQHASSNGNK-----------------------KRP 222
             .|...:......:|...|.|..:.:   |.|.|...|.                       :||
  Fly   223 -KPGDRLLRVDNVSLIGKTLAEAQQIIKCGGHVSGYTNLTIEYDVSVVQSVEFSMGPLLIEIERP 286

  Fly   223 ISPEQVLRMFGATQSSSVPTSSYHYSNGGTRDRDRTGRRSPASSPPSTTHQIYRDRERERDRSVP 287
            ::.:  |.:.....:::||.|                  ...||.||:..:|             
  Fly   287 MNDK--LGLVLCNYTAAVPAS------------------GSGSSTPSSGEKI------------- 318

  Fly   288 NIHELTTRTVSMSRDQQIDHGFGICVKGGKDSGLGVYISRIEENSVAERAG-LRPGDTILEVNGT 351
                                          :...||:|:.|...|:|:|.| |..||.:|.::.|
  Fly   319 ------------------------------EESAGVFIASILPASIADRCGALSVGDQVLSIDDT 353

  Fly   352 --PFTSINHEEALKRCVQILKSSRQISMTVRAPPTLNSTAPLHGFGPPSRDPMYASMAPPLHPQN 414
              ..|:.:.:|.:                     |:..|:...|         |..|      |.
  Fly   354 MIEHTAFSPDEVM---------------------TILDTSTGRG---------YTQM------QI 382

  Fly   415 QAAAAAAAAAASGAGLPFRQTCSWMDRHGRPASPPMEYGGRRSERRDRIRRVELLIE------PG 473
            ..|.|.|....:..|.|   ..|:.....|.:|.    .||:.:|  ..|:..|.:|      ||
  Fly   383 MPAHALARRGHTTLGSP---KYSFSTLESRKSST----AGRQRQR--FARKSSLPLENPACGTPG 438

  Fly   474 QSLGLMIRGGV------------------------EYGLGIF----VTG-----------VDKDS 499
            .:.|.|..||:                        .:|.||.    |:|           :..||
  Fly   439 STGGSMGTGGIHGSSSLGMGLGLCRAESFPVLLDCSHGAGIILSETVSGSGGSGAVAIAQIVPDS 503

  Fly   500 VADRSG-LMIGDEILEVNGQSFLDVTHDEAVGQLKYHKRMSLVIRDVGKVPHSCTS--------- 554
            |||||| :..||.|:.:|....||..   |:.||          .:.|...:..::         
  Fly   504 VADRSGCIQAGDRIVAINKMYSLDAA---AMRQL----------LEGGSSRNGASNGTPANWLEL 555

  Fly   555 -IEMEPWDAYSPT-----------------------------------GTRARRKGQIAT----- 578
             ||.:..||..|.                                   |:.|.|.|.:.:     
  Fly   556 EIEFDMPDAVVPASGVFSVKLLRAGKCGLGLSVSGSSHGGLVISDVKMGSPAHRSGSLRSGDILL 620

  Fly   579 --------------MVEEKARSLLPRH---HFASLSYYIAEYSAKAMTIDAFV------------ 614
                          :::|:.||..|.|   .|.:|       :.|.:.:..|:            
  Fly   621 AVDQHPVQHFNVDALLKEEGRSQNPSHSSSDFTTL-------TIKRIVLPDFLPMSSPIYSNCPA 678

  Fly   615 -AVLLEM---LDTYEKHTLVTEIRELVFPEDRTRYDELVYRRERDPYSVDRHRRKGDPARDLPVT 675
             .:.|.|   :.|...|.|.:......     .:|.:.|..:.|.| ..|..|        :| :
  Fly   679 SGINLGMGMGVSTSTDHDLYSSAYVTA-----GKYADCVSLKSRTP-QPDYFR--------VP-S 728

  Fly   676 ADDLEIIAATGRSPSSDSGLGMTVTDIYKRPALQLPHRPMSAGPILHRSQPASHYQTGSNQSSSS 740
            .||..:.:...||.|..:|                            .:|.|:.:.||.| |.|.
  Fly   729 MDDASLQSVQLRSGSGSNG----------------------------GNQAANSWSTGVN-SRSY 764

  Fly   741 LSPPQQQQQQQQHYQPHHASLRHLGGIGGNVGSGRHHHHPLGPSQLKFRQTKDNQQQEY-GCDEH 804
            ::||..|....:                                   ..:.:|.|:|.| |.:.:
  Fly   765 VAPPNTQSLTTE-----------------------------------LPEEEDEQEQMYPGYELN 794

  Fly   805 RTRRGSETLLPEYEPDAEQELATKLSRSFDMKEEGGTLLGDKGVRRHQSMQRLSAEQNGGSTTEQ 869
            |......|.||   |..|.::....:.| ..|..|.:|        ||.:..:..|..||     
  Fly   795 RYASVDCTALP---PPMENKVYGSAASS-SSKSSGSSL--------HQIIFTVRLEPKGG----- 842

  Fly   870 THEHNPNVVPDHRGNLHITVKKTKPILGIAIEGGANTKHPLPRIINIHENGAAFEAGGLEVGQLI 934
                                     :|||.:.|..:....: .|..:.|.|.|.:.|.:.||..:
  Fly   843 -------------------------LLGITLAGSEDITKSI-TISGLVEGGIAHKNGQIHVGDQL 881

  Fly   935 LEVDGTKVEGL 945
            |.:|...|:|:
  Fly   882 LAIDEHSVQGM 892

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 15/88 (17%)
PDZ_signaling 466..543 CDD:238492 30/122 (25%)
HN_L-whirlin_R2_like 573..653 CDD:259823 17/117 (15%)
PDZ_signaling 886..971 CDD:238492 15/60 (25%)
GripNP_572285.2 PDZ 82..147 CDD:294084 21/83 (25%)
PDZ_signaling 183..254 CDD:238492 14/89 (16%)
PDZ_signaling 278..375 CDD:238492 28/180 (16%)
PDZ 496..>521 CDD:294084 11/24 (46%)
PDZ_signaling 571..658 CDD:238492 11/93 (12%)
PDZ_signaling 832..913 CDD:238492 18/92 (20%)
PDZ_signaling 973..1055 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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