DRSC/TRiP Functional Genomics Resources

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Protein Alignment dysc and Mhcl

DIOPT Version :9

Sequence 1:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_732109.2 Gene:Mhcl / 41955 FlyBaseID:FBgn0026059 Length:2194 Species:Drosophila melanogaster


Alignment Length:1328 Identity:246/1328 - (18%)
Similarity:374/1328 - (28%) Gaps:549/1328 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 ASFGLGPSMGGTQSSSSVPTGGSAGLSGHHLRSSGAPGPSSFEAEDIGMAFGMISP-PPGSG--- 110
            ||.|.|.|:..::.:.|:.:||        |::...|               .|.| ||..|   
  Fly   128 ASNGAGVSVNYSEVTHSLLSGG--------LKNRFLP---------------PIPPKPPKRGILK 169

  Fly   111 -------------PYVGSSAAAGGS-----RVGNSTSSL-----RGAGGRSGLYYSPPGTSYTIV 152
                         .:.||:..|||:     |......||     ||||. .|...|..|||:|.|
  Fly   170 GSRSNMTNVHEEISFAGSAGGAGGTPEMLLRNTFQNESLYEGAARGAGS-IGSNSSQHGTSFTSV 233

  Fly   153 ERPHSPHYYFNSAGVPTKG-------------GSLP---GRGS---AYLSSSPASHMAAGTA--- 195
            |.       ..|.|..|.|             |:||   .:||   ...|.||::.....|.   
  Fly   234 ES-------LRSDGEQTGGQQRAMTLPANARYGALPQGNSQGSHLHVLTSPSPSADSLTDTTNSS 291

  Fly   196 -GTLPTSTAASGRSMG------QHASSNGNKKRPISPEQVLRMFGATQ----SSSVPTSSYHYSN 249
             .|.|.|.:..|.|.|      .||..  :.:.|:.|.|::::....|    ....|...:.:|.
  Fly   292 FATPPFSLSPVGESQGIDRWARVHAFE--DVELPLPPVQLVKLPPPRQLVIRRQKSPRQDFGFSL 354

  Fly   250 GGTRDRDRTGRRSPASSPPSTTHQIYRDRERERDRSVPNIHELTTRTVSMSRDQQIDHGFGICVK 314
            ......|||         .|.|..|:|          |.|.              .:.|.|    
  Fly   355 RKAICLDRT---------ESLTSPIFR----------PVIF--------------AEPGAG---- 382

  Fly   315 GGKDSGLGVYISRIEENSVAERAGLRPGDTILEVNGTPFTSI----------NHEEALKRCVQIL 369
            ||                   ..||.|||.:::|||||...:          |..||:...||.:
  Fly   383 GG-------------------ATGLLPGDRLIKVNGTPVGELPREIIIEMIRNSGEAVTVEVQPV 428

  Fly   370 KSSRQISMTVRAPPTLNSTAPLHGFGPPSRDPMYASMAPPLHPQNQ---AAAAAAAAAASGAGLP 431
            ....::|....||.|.......|.....:.:.:..|.:.....|::   .........|.|.|..
  Fly   429 AELVELSKRCMAPSTATVEEIDHSITNGNCNTLRRSASKRFKRQSRHENGNGGGEEGGAKGVGHD 493

  Fly   432 FRQTCS--------WMDRHGRPASP---PMEYGGRRSERRDRIRRVELLIEPGQSLGLMIRGGVE 485
            .....:        |:...|...:.   |....||..|.:..:|    |:..|:.|         
  Fly   494 LEADVADASQPERVWLVHRGGFTAAIRLPTASSGRDEENKLSLR----LLHNGEQL--------- 545

  Fly   486 YGLGIFVTGVDKDSVADRS--GLMIGDEILE---VNGQSFLDVTHDEAVGQLKYHKR-------- 537
                    .||:|.|..::  .|.:.::|.|   :|..|.|..........|.:.|.        
  Fly   546 --------TVDEDDVEKQNSPALDLVEDICELKYLNEASVLHCLRQRYASNLIHTKAGPTLLVVN 602

  Fly   538 ----MSLVIRDVGKVPHSCTSIEMEPWDAYSPTGTRARRKGQIATMVEEK-------------AR 585
                :||....|..:...|.:.:|.| ..||...|..|      ::||.:             .:
  Fly   603 PMAPLSLYSEKVVSMFRGCKTEDMPP-HVYSLAQTAYR------SLVETRRDQSLIFMGRSGSGK 660

  Fly   586 SLLPRHHFASLSYYIAEYS--AKAMTIDAFVAVL-------------------LEMLDTYEKHTL 629
            |...:|....|:.....|:  ..|..::|...:|                   |..||..:...:
  Fly   661 STSFKHALNYLALAAGAYNNFINAEKVNALCTILEAFGNTKTCLNSNATRMTQLLSLDFDQTGQI 725

  Fly   630 VTEIRELVFPEDR---------------TR-------------YDELVYRRERDPY------SVD 660
            .:...:::.||.:               ||             :.|.:...:..|:      ..|
  Fly   726 ASASLQVLLPERQRAGRRLGHEHSFHIMTRLLAGAAGLLQKELHLENITSEDSHPFISLSQKLED 790

  Fly   661 RHRRKGDPARD------------------------------------------------------ 671
            |||...|..|.                                                      
  Fly   791 RHRAANDFMRTVQAFETLNIDAKAVRGIWSILAAIYHLGIAGVTKLGTGSTARTQFANPTAARKA 855

  Fly   672 ---LPVTADDLEIIA-------------ATGRSPSSDSG-------LGMTVTDIYKR-------- 705
               |.|..:||...|             :..:||:||:|       |...|..:|..        
  Fly   856 SGLLGVNLEDLSSAAFGLTQPNAPNGGLSPSKSPTSDTGHEWAWECLEALVIGLYSEALAAVVAL 920

  Fly   706 --------------------PALQLPHRPMSAGP-------------ILHRSQPASHYQTGSNQS 737
                                |..|   .|.|.|.             :..|.|...|:.|     
  Fly   921 INRQICTSSHTIASIMLIDTPGFQ---NPASCGQQVGATLADLRHNYLQERLQMLFHHTT----- 977

  Fly   738 SSSLSPPQQQQQQQQHYQPHHASLRHLGGIGGNVGSGRHHHHPLGPSQLKFRQTKDNQQQEYGCD 802
              .::|..:..|:....:...||..|.|.:...:... ..:|.:..||...|             
  Fly   978 --LVAPRDRYAQELVEIEMDLASECHPGPLISLIDKA-PQNHVVRSSQRDLR------------- 1026

  Fly   803 EHRTRRGSETLLPE--YEPDAEQELATKLSRSFDMKEEGGTLLGDKGVRRHQSMQRLSAEQNGGS 865
            || .|||...||.|  ..|::..:  |.|.|          |....|.|.|.|:.|..|      
  Fly  1027 EH-DRRGMLWLLDEEAIYPNSNDD--TFLER----------LFSHYGDREHHSLLRKCA------ 1072

  Fly   866 TTEQTHEHNPNVVPDHRGNLHITVKKTKPILGIAIEGGA--NTKHP------------------- 909
                    .|.....|.      ::.|.|:| .|::|..  :.:||                   
  Fly  1073 --------GPRQFVLHH------LQGTNPVL-YAVDGWVRHSREHPGIRNAVSLLQDSSREEINR 1122

  Fly   910 ---------------------------LPRIINIHENGAAFEAGGLEVGQLILEVDGTKVEGL-- 945
                                       |.|:.:|..   :|...|::...::|:|..| |:|:  
  Fly  1123 LYIGSLTRGSGAMVFCGSFAGLEGTQSLRRVSSIRR---SFTTAGVKRNSIMLQVKFT-VDGIID 1183

  Fly   946 ---------------------HHQEVARLIAECFANREKAEITFLVVEAKKSNLEPKPTALIFLE 989
                                 |.:..|.......|.:..:|...:.|...:|.|.....    ||
  Fly  1184 TLRRTGTHFVHCYLLQHNAGKHTKYTANGSPSSAAGQVSSEEEMVNVPLLRSQLRGSQV----LE 1244

  Fly   990 AX--HLLALPASDPLERQKLEFLYEWGI 1015
            |   |.|..|.|.||    |||:..:|:
  Fly  1245 AARLHRLGFPESVPL----LEFVRRFGL 1268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 20/95 (21%)
PDZ_signaling 466..543 CDD:238492 17/93 (18%)
HN_L-whirlin_R2_like 573..653 CDD:259823 17/141 (12%)
PDZ_signaling 886..971 CDD:238492 21/155 (14%)
MhclNP_732109.2 PDZ_signaling 339..426 CDD:238492 28/142 (20%)
MYSc 556..1317 CDD:214580 132/790 (17%)
MYSc_Myo18 575..1305 CDD:276837 128/771 (17%)
GBP_C <1540..1750 CDD:303769
COG1340 1565..1833 CDD:224259
coiled coil 1723..1734 CDD:293879
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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