DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dysc and Pdzd7

DIOPT Version :9

Sequence 1:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_001099832.2 Gene:Pdzd7 / 293996 RGDID:1309882 Length:1031 Species:Rattus norvegicus


Alignment Length:1113 Identity:234/1113 - (21%)
Similarity:350/1113 - (31%) Gaps:436/1113 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 GATQSSSVPTSSYHYSNGGTRDRDRTGRRSPASSPPSTTHQIYRDRERERDRSVPNIHELTTRTV 297
            |...|.|..|::.:......|..:...|...||||......|....|...|.| ..||.:.....
  Rat    29 GHLGSDSASTATRYLLRKQQRLLNGPSRGIRASSPMGRVILINSPIEANSDES-DIIHAVCVEKS 92

  Fly   298 SMSRDQQIDHGFGICVKGGKDSGLGVYISRIEENSVAERAGLRPGDTILEVNGTPFTSINHEEAL 362
            ...|       .|..|:||.:.|||:::|::||.|.||||||..||.|.||||....|.....| 
  Rat    93 PSGR-------LGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSA- 149

  Fly   363 KRCVQILKSSRQISMTVRAPPTLNSTAPLHGFGPPSRDPMYASMAPPLHPQNQAAAAAAAAAASG 427
               |::|.||.::.|.||.               ..|.|                          
  Rat   150 ---VRLLTSSSRLHMMVRR---------------MGRVP-------------------------- 170

  Fly   428 AGLPF-RQTCSWMDRHGRP------ASPPMEYGGRRSERRDRIRRVELLIEPGQS--LGLMIRGG 483
             |:.| ::..:|:|...|.      :|.|.:     |...|.:||:..|......  ||..||||
  Rat   171 -GIKFSKEKTTWVDVVNRRLVVEKCSSTPSD-----SSSEDGVRRIVHLYTTSDDFCLGFNIRGG 229

  Fly   484 VEYGLGIFVTGVDKDSVADRSGLMIGDEILEVNGQSFLDVTHDEAVGQLKYHKRMSLVIRDVGKV 548
            .|:||||:|:.||...:|:.:|:.:||::|..||..|.|::|.:||..||....:.|.|::.|:.
  Rat   230 KEFGLGIYVSKVDHGGLAEENGIKVGDQVLAANGVRFDDISHSQAVEVLKGQTHIMLTIKETGRY 294

  Fly   549 P---------------------------------------------------------------- 549
            |                                                                
  Rat   295 PAYKEMVSEYCWLDRLSNGVLQQLSPASESSSSVSSYASSAPCSSGSLPSDRMDVCLGPEDPTSQ 359

  Fly   550 -----HSCTSIEMEP-------------------------------------------------- 559
                 .:.|:::.||                                                  
  Rat   360 GPGWGRADTAMQTEPDMGGSRVETWCSVRPTVILRDTAIRSDGPSSTRHLDSALSESPKTALLLA 424

  Fly   560 ----------------------------------------------------------------- 559
                                                                             
  Rat   425 LSRPRPPITRSQSHLTLWEEKKQRKKEKSGSSGEKGALQRSKTLMNLFFKGGRQGRPAGDGHREA 489

  Fly   560 W--DAYSPTGTRAR----RKGQIATMVE----------EKARSLLPRHH---------------- 592
            |  |:.|||..|.|    :.|.:..:.:          |:.|:||....                
  Rat   490 WTLDSRSPTKVRPRLDLEKAGSVGPVQKFVTWRLRRDRERGRALLSARSGSPSGQGPNVDEQMQA 554

  Fly   593 FASLSYYIAEYSAKAMTIDAFVAV-------------------LLEMLDTYEKHTLVTEIRELVF 638
            :.|....|.:.:.:.:|.|..:||                   ||.:||...|..|:.:||.:|.
  Rat   555 WESRRPLIQDLARRLLTDDEVLAVTRHCSRYVHEGGVEDLVRPLLAILDRPAKLLLLRDIRSVVA 619

  Fly   639 PEDRTRYDELVYRRERDPYSVDRHRRKGD----PARD---------------------LPVTA-- 676
            |.|..|:|.:|...|.:.:...:.|..|.    |.|.                     |||.:  
  Rat   620 PTDLGRFDSMVMPVEMEAFEALKSRAVGPSALRPTRQDTPPKRHLITPVPDSRGGFYLLPVNSCS 684

  Fly   677 --DDLEI-------IAATGRSPSSDSGLGMTVTDI------YKRPALQLPHRPMSAGPILHR--- 723
              :|.||       ..:.|.|.....|: ..:.|:      .:|.|...|.:|....|...|   
  Rat   685 EDEDGEIRERLGGLKVSLGASAPHHKGI-PPLQDVPVDAFSLRRGACAPPPQPPPVAPRPPRPNW 748

  Fly   724 --SQPASHYQTGSNQSSSSLSPPQQQQQQQQHYQPHHA--SLRHLGGIGGNVGSGRHHHHPLGPS 784
              ::|.|...|..||:.   :|.|...:.:.|.:....  |.....|.|.:.|..|      .||
  Rat   749 LLTEPPSREDTQQNQNQ---TPGQSCSRSRSHSRSRSGSRSRSRSQGRGKSAGCRR------SPS 804

  Fly   785 QLKFRQTKDNQQQEYGCDEHRTRRGSETLLPEYEPDAEQELATKLSRSFDMKEEGGTLLGDKGVR 849
            .... .|..:....|    ||.|: :..|||               |..|.:      :...|||
  Rat   805 PAPI-TTATSANGRY----HRPRK-ARPLLP---------------RPLDGQ------VAKVGVR 842

  Fly   850 R---HQSMQRLSAEQNGGSTTEQTHEHNPNVVPDHRGNLH-ITVKKTKPILGIAIEGGANTK-HP 909
            :   ...:.:.:.::.|.:||               |.|. :|:.|.|..|||:|.||..:| .|
  Rat   843 QEPLENGIDQTAEDEAGNATT---------------GELRTVTLSKMKQSLGISISGGIESKVQP 892

  Fly   910 LPRIINIHENGAAFEAGGLEVGQLILEVDGTKVEGLHHQEVARLIAECFAN--REKAEITFLVVE 972
            :.:|..|...||||....|:.|..::.|||..:|.:.||.....|...:.|  ||..|   |||.
  Rat   893 MVKIEKIFPGGAAFLCRALQAGFELVAVDGESLEQVTHQRAVDTIRRAYRNKAREPME---LVVR 954

  Fly   973 AKKSNLEPKPTALIFLEAXHLLA--LPASDPLERQKLEFLYEWGIDLTETPKPMPTPIPLTKAKN 1035
            .....|.|..:.|..::...|.|  ..|..|:|                 ..|:.|.:|.|:|:.
  Rat   955 VPGPGLLPLSSNLRAIKGQGLAADSSSAHGPIE-----------------DTPILTQLPPTEARQ 1002

  Fly  1036 PPPLPHEL 1043
               |.|.|
  Rat  1003 ---LRHAL 1007

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 32/85 (38%)
PDZ_signaling 466..543 CDD:238492 30/78 (38%)
HN_L-whirlin_R2_like 573..653 CDD:259823 25/124 (20%)
PDZ_signaling 886..971 CDD:238492 31/88 (35%)
Pdzd7NP_001099832.2 PDZ_signaling 84..164 CDD:238492 34/90 (38%)
PDZ_signaling 209..289 CDD:238492 31/79 (39%)
HN_PDZD7_like 555..632 CDD:259824 20/76 (26%)
PDZ_signaling 866..954 CDD:238492 33/90 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D168224at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23116
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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