DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dysc and Grip2

DIOPT Version :9

Sequence 1:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster
Sequence 2:XP_006506166.1 Gene:Grip2 / 243547 MGIID:2681173 Length:1049 Species:Mus musculus


Alignment Length:1316 Identity:228/1316 - (17%)
Similarity:357/1316 - (27%) Gaps:558/1316 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SGIPYDGDPLT---MSAAGNDYAELCDLGPSRWSARPYGYNATAAA------AASFGLGPSMGGT 61
            :|...|..|.:   ...||.|.|.:|     |..:.|..:......      .::.||..| |||
Mouse    21 AGTARDDGPYSKGGKDTAGADGALVC-----RRQSIPEEFRGITMVELIKREGSTLGLTIS-GGT 79

  Fly    62 QSS-----SSVPTGGSAGLS-----GHHLRSSGAPGPSSFEAEDI-------------GMAFGMI 103
            ...     |::..||.|..|     |.::||......:....::|             .:.:.:.
Mouse    80 DKDGKPRVSNLRPGGLAARSDLLNVGDYIRSVNGIHLTRLRHDEIITLLKNVGERVVLEVEYELP 144

  Fly   104 SPPPGSGP-YVGSSAAAGGSRVGNSTSSLRGAGGRSGLYYSPPGTSYTIVERPHSP--------- 158
            .|.|.:.| .:..:......:.|||...:...|....|:.|.| ...|.| ||..|         
Mouse   145 PPAPENNPRIISKTVDVSLYKEGNSFGFVLRGGAHEDLHKSRP-LVLTYV-RPGGPADREGSLKV 207

  Fly   159 -HYYFNSAGVPTKGGSLPGRGSAYLSSSPASHMA----AGTAGTLPTSTAASGRSMGQHASSNGN 218
             ....:..|:|..|.|   ..:|..:....||.|    .....|..|...|||            
Mouse   208 GDRLLSIDGIPLHGAS---HATAIATLQQCSHEALFQVEYDVATPDTVANASG------------ 257

  Fly   219 KKRPISPEQVLRMFGATQSSSVPTSSYHYSNGGTRDRDRTGRRSPASSPPSTTHQIYRDRERERD 283
               |:..| :.:..|:....|:.|.|:              |..||                   
Mouse   258 ---PLVVE-IAKTPGSALGISLTTGSH--------------RNKPA------------------- 285

  Fly   284 RSVPNIHELTTRTVSMSRDQQIDHGFGICVKGGKDSGLGVYISRIEENSVAERAG-LRPGDTILE 347
                                                   :.|.||:..||.:|:| |..||.||.
Mouse   286 ---------------------------------------ITIDRIKPASVVDRSGALHAGDHILA 311

  Fly   348 VNGTPFTSINHEEALKRCVQILKSSRQISMTVRAPPTLNSTAPLHGFGPPSR------------D 400
            ::||.....:..||.|....:.:..|     :...|:..|..||.   ||..            |
Mouse   312 IDGTSTEHCSLVEATKLLASVTEKVR-----LEILPSPQSRRPLK---PPEAVRIQRSEQLHRWD 368

  Fly   401 PMYASMAPPLHPQNQAAAAAAAAAASG-------AGLPFRQ-------TCSWMDRHGRPASPPME 451
            |    .||..|....:...|...||.|       :..||..       .|:......|....|..
Mouse   369 P----SAPSCHSPRPSHCRAPTWAAGGPDQSRSVSSTPFSSPTMNPAFPCANASTLPRGPMSPRT 429

  Fly   452 YGGRRSERRDRIR----------------------RVELLIEPGQSLGLMIRGGVEYGLGIFVTG 494
            ..|||.:||...|                      .|.|..:|....||.::|      |||.|.
Mouse   430 TAGRRRQRRKEHRSSLSLASSTVGPGGQIVHTETTEVVLCGDPLSGFGLQLQG------GIFATE 488

  Fly   495 ----------VDKDSVADRSGLM-IGDEILEVNGQSFLDVTHDEAVGQLKYHKRMSLVIRDVGKV 548
                      ::.||.|:|.||: :||.:|.:||.:..|.|.:||          :.::||....
Mouse   489 TLSSPPLVRFIEPDSPAERCGLLQVGDRVLAINGIATEDGTMEEA----------NQLLRDAALA 543

  Fly   549 PHSCTSIEMEPWDAYSPTGTRARRKGQIATMVEEKARSLLPRHHFASLSYYIAEYSAKAMTIDAF 613
            ......||.:..::..|:......|              ||:.....|...|:..|         
Mouse   544 RKVVLEIEFDVAESVIPSSGTFHVK--------------LPKRRGVELGITISSAS--------- 585

  Fly   614 VAVLLEMLDTYEKHTLVTEIRELVFPEDRTRYDELVYRRERDPYSVDRHRRKGDPARDLPVTADD 678
                                                             |::|:|          
Mouse   586 -------------------------------------------------RKRGEP---------- 591

  Fly   679 LEIIAATGRSPSSDSGLGMTVTDIYKRPALQLPHRPMSAGPILHRSQPASHYQTGSNQSSSSLSP 743
                              :.::||.|             |.:.||        ||:.:....|..
Mouse   592 ------------------LIISDIKK-------------GSVAHR--------TGTLEPGDKLLA 617

  Fly   744 PQQQQQQQQHYQPHHASLRHLGGIGGNVGSGRHHHHPLGPS-----------QLKFRQTKDNQQQ 797
                                       :.:.|..|.|:..:           :||.|:.:||.. 
Mouse   618 ---------------------------IDNIRLDHCPMEDAVQILRQCEDLVKLKIRKDEDNSD- 654

  Fly   798 EYGCDEHRTRRGSETLLPEYEPDAEQELATKLSRSFDMKEEGGTLLGDKGVRRHQSMQRLSAEQN 862
                                    |||.:..:|.:.::|..||.                     
Mouse   655 ------------------------EQESSGAVSYTVELKRYGGP--------------------- 674

  Fly   863 GGSTTEQTHEHNPNVVPDHRGNLHITVKKTKPILGIAIEGGANTKHPLPRII--NIHENGAAFEA 925
                                             |||.|.|   |:.|...||  .:.:.|.|...
Mouse   675 ---------------------------------LGITISG---TEEPFDPIIISGLTKRGLAERT 703

  Fly   926 GGLEVGQLILEVDGTKVEGLHHQEVARLI---AECFANREKAEITFLVVEAKKSNL-------EP 980
            |.:.||..||.::...::|....|...|:   .|....:.|.::...::..:..:|       |.
Mouse   704 GAIHVGDRILAINSVSLKGRPLSEAIHLLQVAGETVTLKIKKQLDRPLLPRQSGSLSEASDVDED 768

  Fly   981 KPTALI--FLEAXHLLALPASDPLERQKLEFLYEWGIDLTE---------TPKPMPTPI------ 1028
            .|.||.  .|.. ...|:|:.|       ..:..||...|:         ||:.....:      
Mouse   769 PPEALKGGLLATRFSPAVPSVD-------SAVESWGSSATDGGFGGTGSYTPQVAVRSVTPQEWR 826

  Fly  1029 PLTKAKNPPPL--------PHELHNNINSQYGSSAALSNHQPHQHTHPHP--------------- 1070
            |.....:||||        |.....:...:.|      :.:|.....|.|               
Mouse   827 PSRLKSSPPPLEPRRTSYTPGPSDESFPEEEG------DWEPPMSPAPGPAREEGFWRVLGEALE 885

  Fly  1071 ------QQQQQQQQHSNTKTPNTNSNKTQGTPTTGTGAATTGSKQQQQPGNTTNTPTKASREATP 1129
                  |.:..::..::..|...:|....|.|         ||:..::......:|........|
Mouse   886 DLESCGQSELLRELEASIMTGTVHSVAVDGRP---------GSRPWRRSREVRTSPEDLQELLLP 941

  Fly  1130 TREQHHQ---HATPTR 1142
            |..:.|:   |..|.|
Mouse   942 TPLEMHRVTLHKDPVR 957

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 18/86 (21%)
PDZ_signaling 466..543 CDD:238492 25/87 (29%)
HN_L-whirlin_R2_like 573..653 CDD:259823 6/79 (8%)
PDZ_signaling 886..971 CDD:238492 21/89 (24%)
Grip2XP_006506166.1 PDZ_signaling 58..140 CDD:238492 15/82 (18%)
PDZ_signaling 160..243 CDD:238492 20/87 (23%)
PDZ_signaling 258..341 CDD:238492 27/160 (17%)
PDZ_signaling 463..551 CDD:238492 27/103 (26%)
PDZ_signaling 564..647 CDD:238492 23/230 (10%)
PDZ_signaling 664..744 CDD:238492 23/136 (17%)
PDZ_signaling 947..1026 CDD:238492 4/11 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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