DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dysc and Tamalin

DIOPT Version :9

Sequence 1:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_620249.1 Gene:Tamalin / 192254 RGDID:70554 Length:394 Species:Rattus norvegicus


Alignment Length:504 Identity:118/504 - (23%)
Similarity:167/504 - (33%) Gaps:182/504 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   376 SMTVRAPPTLNSTAPLHGFGPPSRDPMYASMAPPLHPQNQAAAAA---------AAAAASGAGLP 431
            |...||.||.:        |||      |:.|||..|.::..||.         .|.|.||..||
  Rat    28 SEAARAAPTPS--------GPP------AAAAPPGAPGDELYAALEDYHPAELYRALAVSGGTLP 78

  Fly   432 FRQTCS--WMDRHGRPASPPMEYGGRRSERRDRIRRVELLIEPG--QSLGLMIRGGVEYGLG--- 489
            .|:...  |.:....|               ::.|:| |.:|.|  |:.|..|:   .|||.   
  Rat    79 RRKGSGFRWKNFTQSP---------------EQQRKV-LTLEKGDNQTFGFEIQ---TYGLHHRE 124

  Fly   490 -------IFVTGVDKDSVADRSGLMIGDEILEVNGQSFLDVTHDEAVGQLKYHKRMSLVIRDVGK 547
                   .||..|.:.|.|..:||..||.|..|||.:...:.|.|.|.          :|:..|.
  Rat   125 EQRVEMVTFVCRVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVD----------IIKASGN 179

  Fly   548 VPHSCTSIEMEPWDAYSPTGTRARRKGQIATMVEEKARSLLPRHHFASLSYYIAEYSAKAMTIDA 612
            |      :.:|     :..||..|:                            ||..|:..    
  Rat   180 V------LRLE-----TLYGTSIRK----------------------------AELEARLQ---- 201

  Fly   613 FVAVLLEMLDTYEKHTLVT---EIRELVFPEDRTRYDELVYRRERDPYSVD-----RHRRKGDPA 669
                       |.|.||..   |.|.|:..|.|..:..:|    :||...|     |....|  |
  Rat   202 -----------YLKQTLYEKWGEYRSLMVQEQRLVHGLVV----KDPSIYDTLESVRSCLYG--A 249

  Fly   670 RDLPVTADDLEIIAATGRS-PSSDSGLGMTVTDIY--------KRPALQLPHRPMSA-GPILHRS 724
            ..||.:.....::||.|.: ..|....|.|...:|        :..||..|..|..| ||     
  Rat   250 GLLPGSLPFGPLLAAPGGARGGSRRAKGDTDDAVYHTCFFGGAEPQALPPPPPPARAPGP----- 309

  Fly   725 QPASHYQTGSNQSSSSLSPPQQQQQQQQHYQPHHASLRHLGGIGGNVGSGRHHHHPLGPSQLKFR 789
                    ||.::.:|:..|..:....:     .||:| ..|.||..|.|       .|..|   
  Rat   310 --------GSAETPASVLCPAPRATLSR-----SASVR-CAGPGGGGGGG-------APGAL--- 350

  Fly   790 QTKDNQQQEYGCDEHRTR-RGSETLLPEYEPDAEQELATKLSRSFDMKE 837
            .|:..:|...|....:|: |.....|.::.|.        |:||.:.:|
  Rat   351 WTEAREQALCGAGLRKTKYRSFRRRLLKFIPG--------LNRSLEEEE 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 1/3 (33%)
PDZ_signaling 466..543 CDD:238492 26/88 (30%)
HN_L-whirlin_R2_like 573..653 CDD:259823 13/82 (16%)
PDZ_signaling 886..971 CDD:238492
TamalinNP_620249.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51 12/36 (33%)
PDZ_signaling 99..184 CDD:238492 29/104 (28%)
Interaction with PSCD3. /evidence=ECO:0000250 180..257 26/136 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 293..318 9/37 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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