DRSC/TRiP Functional Genomics Resources

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Protein Alignment dysc and let-413

DIOPT Version :9

Sequence 1:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_001362181.1 Gene:let-413 / 179171 WormBaseID:WBGene00002632 Length:706 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492
PDZ_signaling 466..543 CDD:238492
HN_L-whirlin_R2_like 573..653 CDD:259823
PDZ_signaling 886..971 CDD:238492
let-413NP_001362181.1 PLN00113 14..>370 CDD:215061
leucine-rich repeat 38..60 CDD:275380
leucine-rich repeat 61..83 CDD:275380
leucine-rich repeat 84..106 CDD:275380
leucine-rich repeat 107..129 CDD:275380
leucine-rich repeat 130..152 CDD:275380
leucine-rich repeat 153..175 CDD:275380
leucine-rich repeat 176..198 CDD:275380
leucine-rich repeat 199..221 CDD:275380
leucine-rich repeat 222..244 CDD:275380
leucine-rich repeat 245..265 CDD:275380
leucine-rich repeat 268..290 CDD:275380
leucine-rich repeat 291..313 CDD:275380
leucine-rich repeat 314..336 CDD:275380
leucine-rich repeat 360..382 CDD:275380
PDZ_signaling 574..661 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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