DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dysc and Patj

DIOPT Version :9

Sequence 1:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_766284.2 Gene:Patj / 12695 MGIID:1277960 Length:1834 Species:Mus musculus


Alignment Length:1124 Identity:226/1124 - (20%)
Similarity:369/1124 - (32%) Gaps:356/1124 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LTMSAAGNDYAELCDLGPSRWSARP-----YGYNATAAAAASFGLGPSMGGTQSSSSVPTGGSAG 74
            |..:.:|.:..| |....|..||.|     |.|:.......:|||       .|.:.:|:....|
Mouse   914 LHANLSGGERLE-CHDAESMMSAYPQEMQQYSYSTADMMEETFGL-------DSRAPIPSSEGNG 970

  Fly    75 LSG--------HHLRSSGAPGPSSFEAEDIGMAFGMISPPPGSGPYVGSSAAAGGSRVGNSTSSL 131
            ..|        |.|.||             .:..||:.|....||.|.....|...|        
Mouse   971 QHGRFDDMGHLHSLTSS-------------SLDLGMMIPSDLQGPGVLVDLPAVAQR-------- 1014

  Fly   132 RGAGGRSGLYYSPPGTSYTIVERPHSPHYYFNSAGVPTKGGSLPGRGSAYLSSSPASHMAAGTAG 196
                                .|:...|.|...||.|.||               |:|||      
Mouse  1015 --------------------REQEDLPLYRLPSARVVTK---------------PSSHM------ 1038

  Fly   197 TLPTSTAASGRSMGQHASSNGNKKRPISPEQVLRMFGATQSSSVPTSSYHYSNGGTRDRDRTGRR 261
                     |....:||::                     :..:|                    
Mouse  1039 ---------GLVSSRHANA---------------------ACELP-------------------- 1053

  Fly   262 SPASSPPSTTHQIYRDRERERDRSVPNI-HELTTRTVSMSRDQQIDHGFGICVKGGK-------- 317
                           :||.......||. |....|.|.:.|:..:  ..||.:.||:        
Mouse  1054 ---------------EREEGEGEETPNFSHWGPPRIVEIFREPNV--SLGISIVGGQTVIKRLKN 1101

  Fly   318 -DSGLGVYISRIEENSVAERA-GLRPGDTILEVNGTPFTSINHEEALKRCVQILKSS-------- 372
             :...|::|.::.|:|.|.:. .|:.||.||||:|....:.:|.||    |:.:||:        
Mouse  1102 GEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHAEA----VEAIKSAGNPVVFVV 1162

  Fly   373 RQISMTVRAPPTLNS----------------TAPLHGFGPPSRDPMYASMAPPLHPQNQAAAAAA 421
            :.:|.|.|..||:|:                .|..||..||   ||  .:.||..        |.
Mouse  1163 QSLSSTPRVIPTVNNKGKTPAPNQDQNTQERKAKRHGTAPP---PM--KLPPPYR--------AP 1214

  Fly   422 AAAASGAGLPFRQTCSWMDRHGRPASPPMEYGGRRSERRDRIRRVELLIEPGQSLGLMIRGGVEY 486
            :|...|:    .:.|:..|:..|.         |.::....:..:| |.:....|||.:.|..:.
Mouse  1215 SADMEGS----EEDCALTDKKIRQ---------RYADLPGELHIIE-LEKDKNGLGLSLAGNKDR 1265

  Fly   487 G-LGIFVTGVDKDSVADRSGLM-IGDEILEVNGQSFLDVTHDEAVGQLK-YHKRMSLV-IRDVGK 547
            . :.|||.|::.:..|...|.| ||||:||:|.|.....:|..|...:| ...|:.|| ||:...
Mouse  1266 SRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPTRVKLVFIRNEDA 1330

  Fly   548 VPHSCTSIEMEPWDAYSPTGTRARRKGQIATMVEEKARSLLPRHHFASLSYYIAE-YSAKAMTID 611
            |    :.:.:.|:...|.:.:.....|....:..|:..|:..:|        :.| .|:|...:.
Mouse  1331 V----SQMAVAPFPELSHSPSPVEDLGGTELVSSEEESSVDAKH--------LPEPESSKPEDLS 1383

  Fly   612 AFVAVLLEMLDTYEKHTLVTEIRELVFPED------RTRYDELVYRRERD--------------- 655
            ..|          :.:.:..:.:|...|:.      :..|...|....:|               
Mouse  1384 QVV----------DDNMVAEQQKESESPDSAACQIKQQTYSTQVSSSSQDSPSSPAPLCQSAHAD 1438

  Fly   656 ---------PYSVDRHRRKGDPARDLPVTADDLEIIAATGRSPSSDSGLGMTVT----------- 700
                     |..||......|||....|...::.|..:.||     ||||:::.           
Mouse  1439 VTGSGNFQAPLPVDPAPLSVDPATCPIVPGQEMIIEISKGR-----SGLGLSIVGGKDTPLDAIV 1498

  Fly   701 --DIYKRPALQLPHRPMSAGPILHRS----QPASHYQ--TGSNQSSSSLSPPQQ----------Q 747
              ::|:..|.....|..:...||..:    :.:||.:  |...|:      ||:          |
Mouse  1499 IHEVYEEGAAARDGRLWAGDQILEVNGVDLRSSSHEEAITALRQT------PQKVRLVVYRDEAQ 1557

  Fly   748 QQQQQHYQPHHASLRHLGG-------IGGNVGSGRHHHHPL--GPSQLKFRQTKDNQQQEYGCDE 803
            .:.:::.:.....|:...|       :|...|||......:  |.:.|..|..:.:|......::
Mouse  1558 YRDEENLEVFLVDLQKKTGRGLGLSIVGKRSGSGVFISDIVKGGAADLDGRLIRGDQILSVNGED 1622

  Fly   804 --HRTRRGSETLLPEYEPDAEQEL------ATKLSRSFDMKEEGGTLLGDKGVRRH-----QSMQ 855
              |.::....|:|...:...:.|:      :...||......:|.........|..     .|:|
Mouse  1623 MRHASQETVATILKCVQGLVQLEIGRLRAGSWAASRKTSQNSQGDQHSAHSSCRPSFAPVITSLQ 1687

  Fly   856 RLSAEQNGGSTTEQTHEHNPNVVPDHRGNLHITVKKTKPILGIAIEGGANTKHPLPR----IINI 916
            .|...:......::..|..|..|.        .:::....|||:|.||..:  ||..    |..|
Mouse  1688 NLVGTKRSSDPPQKCTEEEPRTVE--------IIRELSDALGISIAGGKGS--PLGDIPIFIAMI 1742

  Fly   917 HENGAAFEAGGLEVGQLILEVDGTKVEGLHHQEVARLIAECFANREKAEITFLVVEAKKSNLEPK 981
            ..||.|.....|:||..|:.::|..::||.|.:...|:...|     ..|...||  ..:|:...
Mouse  1743 QANGVAARTQKLKVGDRIVSINGQPLDGLSHTDAVNLLKNAF-----GRIILQVV--ADTNISAI 1800

  Fly   982 PTALIFLEAXHLLALPASD 1000
            .|.|..:.|...|..|.:|
Mouse  1801 ATQLEIMSAGSQLGSPTAD 1819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 28/103 (27%)
PDZ_signaling 466..543 CDD:238492 27/80 (34%)
HN_L-whirlin_R2_like 573..653 CDD:259823 12/86 (14%)
PDZ_signaling 886..971 CDD:238492 24/88 (27%)
PatjNP_766284.2 L27_2 8..65 CDD:312549
PDZ_signaling 135..218 CDD:238492
PDZ_signaling 248..325 CDD:238492
PDZ_signaling 363..450 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 456..488
PDZ_signaling 572..636 CDD:238492
PDZ 685..774 CDD:214570
PDZ_signaling 1072..1163 CDD:238492 26/96 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1171..1219 14/60 (23%)
PDZ 1242..1327 CDD:214570 28/85 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1340..1453 16/130 (12%)
MPDZ_u10 <1453..1468 CDD:374710 4/14 (29%)
PDZ 1469..1554 CDD:214570 18/95 (19%)
PDZ_signaling 1566..1646 CDD:238492 13/79 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1657..1676 3/18 (17%)
PDZ_signaling 1707..1792 CDD:238492 26/99 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1811..1834 3/9 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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