DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dysc and Il16

DIOPT Version :9

Sequence 1:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster
Sequence 2:XP_006229550.1 Gene:Il16 / 116996 RGDID:1583872 Length:1425 Species:Rattus norvegicus


Alignment Length:1345 Identity:251/1345 - (18%)
Similarity:395/1345 - (29%) Gaps:482/1345 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 WSARPYGYNATAAAAASFGLGPSMGGTQSSSSVPTGGSAGLSGHHLRSSGAPGPSSFEAEDIGMA 99
            |...|...|.|.||||.    ||...|.                      .|.|...|.:..|:.
  Rat    60 WHLLPGQANRTHAAAAK----PSSSTTH----------------------RPRPGEQERKKRGLT 98

  Fly   100 FGM-ISPPPGSGPYVGSSAAAGGSRVGNSTSSLRGAGGRSGLYYSPPGTSY-----TIVERPHSP 158
            ..: :.|...||....|:.....||      ||.....::....|.|...|     |.:.:....
  Rat    99 SSLRMEPHSHSGKSRKSTKFRSISR------SLILCNAKTSDDSSSPDEKYPDPFETSLCQDKEG 157

  Fly   159 HYYFNSAGVPTKGGSLPGRGSAYLSSSPASHMAAGT-------------AGTLPTSTAASGRSMG 210
            .::.:.....|....|.......|:|..|...|||:             ..:..:|...:|:|..
  Rat   158 FFHSSMQLADTSEAGLSNIPDLALASEAAQLQAAGSDRGKHCRKMFFLKESSTTSSKEKAGKSEA 222

  Fly   211 QHAS------------SNGNKKRPISPEQVLRMFGATQSSSVPTSSYHYSNGGTRDRDRTGRRSP 263
            |.::            ||.....|.|..::  .|..|:.|:.||....||....|.........|
  Rat   223 QSSNFLFPKACHQRTRSNSTSVNPYSAREM--DFPMTKKSAAPTDRQPYSLCSNRKSLSQQLDYP 285

  Fly   264 ASSPPSTTHQIYRDRERERDRSVPNIHELT-------TRTVSMSRDQQIDHGFGICVKGGKDS-- 319
            .|.....|          |..|...:.:|:       ...:.:.:.|.  .|.|..:.|||||  
  Rat   286 VSGTARPT----------RSLSTAQLGQLSGGLQASVISNIVLMKGQA--KGLGFSIVGGKDSIY 338

  Fly   320 -GLGVYISRIEENSVAERAG-LRPGDTILEVNGTPFTSINHEEALKRCVQILKSSRQISMTVRAP 382
             .:|:|:..|.....|...| |:.||.|||:||.....:.|::||::..|..|.  .:::|||..
  Rat   339 GPIGIYVKSIFAGGAAAADGRLQEGDEILELNGESIAGLTHQDALQKFKQAKKG--LLTLTVRTR 401

  Fly   383 PTLNSTAPLHGFGPPSRDPMYASMAPPLHPQNQAAAAAAAAAASGA--GLPFRQTCSWMDRHGRP 445
            .|.          |||   :.:.::|||       ..:.:::..||  ..||...        .|
  Rat   402 LTT----------PPS---LCSHLSPPL-------CRSLSSSTCGAQDSSPFSLE--------SP 438

  Fly   446 ASPPMEYGGRRSERRDRIR---RVELLIEPGQSLGLMIRGGVEYGL----------GIFVTGVDK 497
            |||       .|..:...|   .|.|..|.|..||:        ||          |:|:..:..
  Rat   439 ASP-------ASTAKPNYRIMVEVSLKKEAGVGLGI--------GLCSIPYFQCISGVFIHTLSP 488

  Fly   498 DSVADRSG-LMIGDEILEVNGQSFLDVTHDEAVGQLKYHKRMSLVIRDVGKVPHSCTSIEMEPWD 561
            .|||...| |..||||:|:|......:|.:|....|.:        .|.|.||            
  Rat   489 GSVAHLDGRLRCGDEIVEINDSPVHCMTLNEVYTILSH--------CDPGPVP------------ 533

  Fly   562 AYSPTGTRARRKGQIATMVEEKARSLLPRHHFASLSYYIAEYSAKAMTIDAFVAVLLEMLDTYEK 626
                                    .::.||....:|    |...|.....|...|....    |:
  Rat   534 ------------------------IIVSRHPDPQVS----EQQLKEAVAQAVEGVKFGK----ER 566

  Fly   627 HTLVTE-IRELVFPEDRTRYDELVYRRERDPYSVDRHRRKGDPARDLPV--TADDLEIIAATGRS 688
            |....| ::.|    :.:.:......:||:.:|...|||    |:.:.|  ::|...:..:.|.|
  Rat   567 HQWSLEGVKRL----ESSWHGRPTLEKEREKHSAPPHRR----AQKIMVRSSSDSSYMSGSPGGS 623

  Fly   689 PSS-------DSGLGMTVTDIY-----KRPALQLPHRPMSAGPILHRS----------------- 724
            |.|       ..|.|.|.:...     :.|...:|.||....|.|..|                 
  Rat   624 PCSAGAELQPSEGEGSTHSPSLPPGEEQEPCPGVPSRPHQESPPLSESLERDSHPPLKLKNSFEI 688

  Fly   725 -----------------------------------QPASHY------------------------ 730
                                               .|:.|.                        
  Rat   689 LVRKPTSTKPKPPPRKYFKNDSEPQKKLEEKEKVTDPSGHTLPTCSQETRELLPLLLQEDTAGRT 753

  Fly   731 ---------QTGSNQSSSSL-SPPQQQQQQQQHYQP-HHASLRH--------------------- 763
                     ...|.|:|||. ..|::....:....| .|..|:.                     
  Rat   754 LCTAACCPGPAASTQTSSSTEGEPRRSASPETPASPGKHPLLKRQARMDYSFDSTTEDPWVRISD 818

  Fly   764 -LGGIGGNVGSGRHHHHPLGPSQLKFRQTKDNQQQEYGCDEHRTRRGSETLLPEYE--------- 818
             :..:...:.|..|.|.||.|:.....:.......|.|..:..|..|:..:....:         
  Rat   819 CIKNLFSPIMSENHSHMPLQPNASLGEEDGTQGHPEGGLSKMDTANGAPRIFKSADGSTVKKGPP 883

  Fly   819 -------------------PDAEQ--ELATKLSRSFDMKEEGG--TLLGDKGVRRHQSMQRLSAE 860
                               |:..:  |:|:.:..:...::..|  :......:|     ||:|:.
  Rat   884 VAPKPAWFRQSLKGLRNRVPETRRAPEVASAIQTTPVSRDASGPQSQASSSSIR-----QRISSF 943

  Fly   861 QNGGSTTEQTHEHNPNVVPDHRGNLHITVKKTKPILGIAIEGGANTKHPLPRIINIHENGAAFEA 925
            :|.||:.          :|| ||...::::.|         .|..|:.|                
  Rat   944 ENFGSSQ----------LPD-RGVQRLSLQPT---------SGETTRLP---------------- 972

  Fly   926 GGLEVGQLI-LEVDGTKVEGLHHQEVARLIAECFANREKAEITFLVVEAKKSNLEPKPTALIFLE 989
            |..:.|:.. |...||||...|.|                             .|.:|.:..|..
  Rat   973 GKQDEGRFSGLPAQGTKVTAKHRQ-----------------------------TEVEPPSTTFPN 1008

  Fly   990 AXHLLALPASDPLERQKLEFLYEWGIDLTETPKPMPTPIPLTKAKNPPPLPHELHNNINSQYGSS 1054
            :..:     .||              |::|:|.|...|.|  ||.:|.||...|........|..
  Rat  1009 SSEV-----GDP--------------DMSESPPPGQRPNP--KALSPDPLLRLLTTQTEDTQGPG 1052

  Fly  1055 AALSNHQPHQHTHPHPQQQQQQQQHSNTKTPNTNSNKTQG---------------TPTTGT-GAA 1103
            ..:    |.|.....|..:.|..:   ||..:..|:|...               .|::.: |..
  Rat  1053 FKM----PSQRARSFPLTRTQSYE---TKLLDEKSSKLYSISSQLSSAVMKSLLCLPSSASCGQI 1110

  Fly  1104 TTGSKQQQQPGNTTNTPTKAS--REATPTREQHHQHATPTREHQQ 1146
            |...|::..|.:..|....|.  .||..:......:.:..||:.:
  Rat  1111 TCIPKERVSPKSPCNNSAAAEGFGEAVASDTGFSLNLSELREYSE 1155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 27/89 (30%)
PDZ_signaling 466..543 CDD:238492 24/87 (28%)
HN_L-whirlin_R2_like 573..653 CDD:259823 11/80 (14%)
PDZ_signaling 886..971 CDD:238492 13/85 (15%)
Il16XP_006229550.1 PDZ_signaling 316..391 CDD:238492 25/76 (33%)
PDZ_signaling 454..536 CDD:238492 28/133 (21%)
PDZ_signaling 1207..1284 CDD:238492
PDZ 1329..1413 CDD:214570
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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