DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dysc and USH1C

DIOPT Version :9

Sequence 1:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster
Sequence 2:XP_016872564.1 Gene:USH1C / 10083 HGNCID:12597 Length:956 Species:Homo sapiens


Alignment Length:996 Identity:199/996 - (19%)
Similarity:326/996 - (32%) Gaps:368/996 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 HQIYRDRERERDRSVPNIHELTTRTVSMSRDQQID----HGFGICVKGGKDSGLGVYISRIEENS 332
            ||:..|             :||.|.....::.::|    .|.|:.|:||.:.|.|::||.:.:..
Human    70 HQVEYD-------------QLTPRRSRKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGG 121

  Fly   333 VAERAGLRPGDTILEVNGTPFTSINHEEALKRCVQILKSSRQISMTVRAPPTLNSTAPLHGFGPP 397
            .|:..||:.||.|:.:||...:|..|||.    :.::::.:.:|:.||....:            
Human   122 QADSVGLQVGDEIVRINGYSISSCTHEEV----INLIRTKKTVSIKVRHIGLI------------ 170

  Fly   398 SRDPMYASMAPPLHPQNQAAAAAAAAAASGAGLPFRQTCSWMDRHGRPASPPMEYGGRR------ 456
               |:.:|...||                        |..::|:.      ..|.||.|      
Human   171 ---PVKSSPDEPL------------------------TWQYVDQF------VSESGGVRGSLGSP 202

  Fly   457 SERRDRIRRVELLIEPGQSLGLMIRGGVEYGLGIFVTGVDKDSVADRSGLMIGDEILEVNGQSFL 521
            ..|.::.::|.:.:...:.||..|..|.....|||::.|...|::...||.|||:|:||||..|.
Human   203 GNRENKEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFS 267

  Fly   522 DVTHDEAVGQLK----------------------------------------------------- 533
            ::.|.|||..||                                                     
Human   268 NLDHKEAVNVLKSSRSLTISIVAAAGRELFMTDRERLAEARQRELQRQELLMQKRLAMESNKILQ 332

  Fly   534 -----------------------YHKRMSLVIRDVGK----------------VPHSCTSIEMEP 559
                                   |.|.|..::.:..|                :|.:.|: |:.|
Human   333 EQQEMERQRRKEIAQKAAEENERYRKEMEQIVEEEEKFKKQWEEDWGSKEQLLLPKTITA-EVHP 396

  Fly   560 --------------WDAYSPTGTRARRKGQIATMVEEKAR--SLLP-RHHFASLSYYIAEYSAKA 607
                          :|...||   .|:||:    .::||:  ||.. |.:...|.:....|..|.
Human   397 VPLRKPKSFGWFYRYDGKFPT---IRKKGK----DKKKAKYGSLQDLRKNKKELEFEQKLYKEKE 454

  Fly   608 MTIDAFVAVLLEMLDTYEKHTLVTEIRELVFPEDRTRYDELVYRRERDPYSVDRHRRKGDPARDL 672
                       |||:. ||...:..:.:.|...:|...:|    .|:..|.|:|..:    .|..
Human   455 -----------EMLEK-EKQLKINRLAQEVSETEREDLEE----SEKIQYWVERLCQ----TRLE 499

  Fly   673 PVTADDLEII-AATGRSPSSDS-------------GLGMTVTDI--------YKRP----ALQ-L 710
            .:::.|.||. ..||..|...|             ||.:..||:        |..|    ||. :
Human   500 QISSADNEISEMTTGPPPPPPSVSPLAPPLRRFAGGLHLHTTDLDDIPLDMFYYPPKTPSALPVM 564

  Fly   711 PHRPMSAGPILHRSQPASHYQTGSNQSSSSLS--------------PPQQQQQQQQHYQPHHASL 761
            ||.|.|..|  |: .||......|...|:|.|              ||....|.....:|..::|
Human   565 PHPPPSNPP--HK-VPAPPVLPLSGHVSASSSPWVQRTPPPIPIPPPPSVPTQDLTPTRPLPSAL 626

  Fly   762 R--------HLGGIGGNVGSGRHHHHPLGPSQLKFRQTKDNQQQEYGCDEHRTRRG------SET 812
            .        ..|..|..|......:|...|:.....:.......:..|...:..||      |:.
Human   627 EEALSNHPFRTGDTGNPVEDWEAKNHSGKPTNSPVPEQSFPPTPKTFCPSPQPPRGPGVSTISKP 691

  Fly   813 LLPEYEPD-----------AEQEL-------ATKLSRSFDMKEEGGTLLGDKGVRRHQSMQRLSA 859
            ::...||:           ..||:       .|...:.|...|||           .......:.
Human   692 VMVHQEPNFIYRPAVKSEVLPQEMLKRMVVYQTAFRQDFRKYEEG-----------FDPYSMFTP 745

  Fly   860 EQNGGSTTEQTHEHNPNVVPDHRGNLHITVKKTKPILGIAIEGGANTKHPLPRII--NIHENGAA 922
            ||..|.....                 :.:|| :..|.:|:|||.::  |:.:::  .::|.|||
Human   746 EQIMGKDVRL-----------------LRIKK-EGSLDLALEGGVDS--PIGKVVVSAVYERGAA 790

  Fly   923 FEAGGLEVGQLILEVDGTKVEGLHHQEVARLIAECFANREKA--------EITFLVVEAKKSNLE 979
            ...||:..|..|:.::|..|...       .:||..|..:||        ::...|...|:.:.|
Human   791 ERHGGIVKGDEIMAINGKIVTDY-------TLAEAEAALQKAWNQGGDWIDLVVAVCPPKEYDDE 848

  Fly   980 PKPTALIFLEAXHLLALPASDPLERQKLEFLYEWGIDLTETPKPMPTPIPLTKAKNPPPLPHELH 1044
                         |.:||:|                 :.|:|:|:...:....|.:......:|.
Human   849 -------------LASLPSS-----------------VAESPQPVRKLLEDRAAVHRHGFLLQLE 883

  Fly  1045 NNINSQYGS-----SAALSNH 1060
            ..:|.|.|.     .||.|.|
Human   884 PTVNRQAGHRALCVPAACSGH 904

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 24/89 (27%)
PDZ_signaling 466..543 CDD:238492 30/152 (20%)
HN_L-whirlin_R2_like 573..653 CDD:259823 18/82 (22%)
PDZ_signaling 886..971 CDD:238492 23/94 (24%)
USH1CXP_016872564.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.