DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dysc and pdzd7b

DIOPT Version :9

Sequence 1:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster
Sequence 2:XP_009298981.1 Gene:pdzd7b / 100331399 ZFINID:ZDB-GENE-100624-3 Length:783 Species:Danio rerio


Alignment Length:890 Identity:181/890 - (20%)
Similarity:284/890 - (31%) Gaps:350/890 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 ELTTRTVSMSRDQQIDHGFGICVKGGKDSGLGVYISRIEENSVAERAGLRPGDTILEVNGTPFTS 355
            |:...||....|.|:    |..|:||.:.||.|:||::::||.|:.|||..||.:|||||....:
Zfish     7 EIVRLTVLRGDDGQL----GFSVRGGSEHGLSVFISKVQKNSAADVAGLCVGDKLLEVNGVSLEN 67

  Fly   356 INHEEALKRCVQILKSSRQISMTVRAPPTLNSTAPLHGFGPPSRDPMYASMAPPLHPQNQAAAAA 420
            |:...|:|    :|....::.|.::.                      ....|.:...|:..   
Zfish    68 ISMSSAVK----VLTGHSRLQMLIQR----------------------LGRVPGVRYTNEKT--- 103

  Fly   421 AAAAASGAGLPFRQTCSWMDR-HGR----PASPPMEYGGRRSERRDRIRRVELLIEPGQ-SLGLM 479
                            :|:|. |.|    .|..|:..   .|......|.|.|.:...| .|||.
Zfish   104 ----------------TWVDLIHRRMVVEEADAPVSV---YSSDGALCRTVHLHLSQNQPCLGLN 149

  Fly   480 IRGGVEYGLGIFVTGVDKDSVADRSGLMIGDEILEVNGQSFLDVTHDEAVGQLKYHKRMSLVIRD 544
            ||||.||.|||:::.:|...:|::.|:.:||:||..||.:|.::.|..||..||....:.:.|::
Zfish   150 IRGGREYNLGIYISKLDPGGLAEQGGVKMGDQILSANGVNFENINHHRAVEVLKSQTHVIMTIKE 214

  Fly   545 VGKVPHSCTSIEMEPWDAYSPTGT----------------------------------------- 568
            .|:.|.....:....|...|.:||                                         
Zfish   215 AGRYPAYKEMVTELSWMNKSGSGTVYSSLQDSESSSSSLSSGTPLGSVSGFSQATLPVSLPLGAK 279

  Fly   569 ------------------------------------------------------RARRKGQIATM 579
                                                                  .:||:|:..::
Zfish   280 MSNISSSTGSQFHPDSTEDDGQSERLRTVSRGPTEVLQDSAIRSRADEDWSGNRESRREGRKTSL 344

  Fly   580 V---------------------EEK---------------------------------ARSLLPR 590
            :                     |||                                 :||..|.
Zfish   345 LIALSRPSPPIRRTRSHVTISEEEKKQKRKQTEREGGSSPLQRSKTFFGLFRKRDSSRSRSRSPP 409

  Fly   591 HHFASLS-------------------------------------YYIAEYSAKAMTIDAFVAVLL 618
            ...:||:                                     .|::|..     :...|..||
Zfish   410 RSESSLAGRCNGDVSEQDSLVPLREMAVRLLEDEDVSVLMGICRRYLSERG-----LQTLVHPLL 469

  Fly   619 EMLDTYEKHTLVTEIRELVFPEDRTRYDELVYRRERDPYSVDRHR-RKGDPARDLPVT--ADDLE 680
            .:|:|.||..|:.|||.||...|...::.:|...|.:.|.:.:.| |:..|.|. |.|  |....
Zfish   470 AILNTPEKLLLLREIRTLVSTSDLPLFNSMVSPFEEEAYDILKSRSRRSSPLRS-PQTGLAPRRH 533

  Fly   681 IIAATGRSPSSDSGLGMTVTDIYKR-----PALQL-------PHRPMSAGPILHRSQPASHYQTG 733
            :|...   |....|..:...|..||     .:|:|       ..:|.|..|:|  ..|...:   
Zfish   534 LITPV---PDLQGGFELQAADDIKRQNQLLESLELLRLSCCPADQPRSFSPLL--DVPLDTF--- 590

  Fly   734 SNQSSSSLSPPQQQQQQQQHYQPHHASLRHLGGIGGNVGSGRHHHHPLGPSQLKFRQTKDNQQQE 798
                                            |...:|.|.|  ...|.|:.|    ..:|    
Zfish   591 --------------------------------GPSDSVNSSR--TKALLPNWL----LTEN---- 613

  Fly   799 YGCDEHRTRRGSETLLPEYEPDAEQELATKLSRSFDMKEEGGTLLGD--KGVRRHQSMQRLSAEQ 861
                     |.||:.:|.....:|......|....|.......||..  ..:::..|.....|||
Zfish   614 ---------RRSESCIPSSAVRSESPEDDVLFTVVDAPRHKRPLLAQVFGSMKKSHSSTVSPAEQ 669

  Fly   862 NGGSTTEQTHEHNPNVVPDHRGNLHIT---------VKKTKPILGIAIEGGANTK-HPLPRIINI 916
            ..|..|          .||    :||.         :.|||..|||:|.||:.:: .|:.:|..|
Zfish   670 MCGKKT----------APD----VHIQPAFELTTVHISKTKQSLGISISGGSESRVQPMVKIERI 720

  Fly   917 HENGAAFEAGGLEVGQLILEVDGTKVEGLHHQEVARLIAECFANR 961
            ...|||..:..|:.|..::.|||..::.:.||:...:|.:.|:|:
Zfish   721 FPGGAASTSDDLQAGFELVSVDGVSLQDVTHQDAVDIIRQAFSNK 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 31/85 (36%)
PDZ_signaling 466..543 CDD:238492 30/77 (39%)
HN_L-whirlin_R2_like 573..653 CDD:259823 26/170 (15%)
PDZ_signaling 886..971 CDD:238492 27/86 (31%)
pdzd7bXP_009298981.1 PDZ_signaling 8..88 CDD:238492 31/87 (36%)
PDZ_signaling 133..213 CDD:238492 31/79 (39%)
HN_PDZD7_like 425..502 CDD:259824 17/81 (21%)
PDZ_signaling 687..775 CDD:238492 25/79 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D168224at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.