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Protein Alignment CG8745 and Abat

DIOPT Version :9

Sequence 1:	NP_648665.1	Gene:	CG8745 / 39530	FlyBaseID:	FBgn0036381	Length:	494	Species:	Drosophila melanogaster
Sequence 2:	NP_112265.1	Gene:	Abat / 81632	RGDID:	620948	Length:	500	Species:	Rattus norvegicus

Alignment Length:	500	Identity:	109/500 - (21%)
Similarity:	188/500 - (37%)	Gaps:	130/500 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly    16 LSKTETIKLRNQHIGQACQLFYRSDPLKIV----RGQGQYMFDEEGTRYLDCINNVAHV--GHCH 74
            |.|||....|:|.:.:.......::.:...    ..:|.|:.|.:|.|.||..:.::.|  |:.|
  Rat    45 LMKTEVPGPRSQELMKQLNTIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYNH 109

  Fly    75 PEVVRAGALQMATISTNNRFLH-------------DELVQCARTLTSKMPEPLSVCFFVNSGSEA 126
            |.:.:. ..|....||   |::             |:|   ..:|.|..|:.:.....:..||.:
  Rat   110 PALAKL-VQQPQNAST---FINRPALGILPPENFVDKL---RESLMSVAPKGMCQLITMACGSCS 167

  Fly   127 NDLAL-----------RLARNFTKRQ---------------DVITLDHAYHG---------HLQS 156
            |:.|.           |..|.|:|.:               .:::...|:||         |.::
  Rat   168 NENAFKTIFMWYRSKERGQRGFSKEELETCMVNQSPGCPDYSILSFMGAFHGRTMGCLATTHSKA 232

  Fly   157 VMEVSPYKFNQPGGEAKPDYVHVAPCPDVYGGKF------TDKMYPDADMGALYAQPIEEICQKQ 215
            :.::....|:.|          :||.|.:   |:      ||....:|..    .:.:|::..|.
  Rat   233 IHKIDIPSFDWP----------IAPFPRL---KYPLEEFVTDNQQEEARC----LEEVEDLIVKY 280

  Fly   216 LAKGQGVAAFIAESLQSCGGQILPPAGYFQAVYDAVRSAGGVCIADEVQVGFGRVGSHYWAFETQ 280
            ..|.:.||..|.|.:||.||.......:|:.:.|..|..|...:.||||.|.|..|. :||.|..
  Rat   281 RKKKRTVAGIIVEPIQSEGGDNHASDDFFRKLRDIARKHGCAFLVDEVQTGGGCTGK-FWAHEHW 344

  Fly   281 NV--IPDIVCVAKPMGNGHPVGAVVTTPEIAQAFH------ATGVAYFNTYGGNPVSCAIANAVM 337
            .:  ..|::..:|.|..|             ..||      :.....|||:.|:|....:...|:
  Rat   345 GLDDPADVMSFSKKMMTG-------------GFFHKEEFRPSAPYRIFNTWLGDPSKNLLLAEVI 396

  Fly   338 RVIEEEGLQQKALVLGDYLLEECNRLKQEF-ECIGDVRGAGLFVGIELVQDRKERIPDKKAAHWV 401
            .:|:.|.|.......|..||.....|:.:: :.:..|||.|.|...:        .|||.    :
  Rat   397 NIIKREDLLNNVAHAGKTLLTGLLDLQAQYPQFVSRVRGRGTFCSFD--------TPDKA----I 449

  Fly   402 VNRMKQLHRVLVSSD------GPNDNVIKLKPPMCFNRENADEFL 440
            .|::     :|::.:      |..|..|:.:|.:.|...:|..||
  Rat   450 RNKL-----ILIARNKGVVLGGCGDKSIRFRPTLVFRDHHAHLFL 489

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.