DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hml and CG13252

DIOPT Version :9

Sequence 1:NP_524060.2 Gene:Hml / 39529 FlyBaseID:FBgn0029167 Length:3843 Species:Drosophila melanogaster
Sequence 2:NP_649248.3 Gene:CG13252 / 40289 FlyBaseID:FBgn0037016 Length:384 Species:Drosophila melanogaster


Alignment Length:330 Identity:70/330 - (21%)
Similarity:105/330 - (31%) Gaps:101/330 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   621 TLDGDPNTDLTSRTGKKLATVKAFADAWR-----VEDRSELCQVE----NSAEMEFGMDSCEQSK 676
            |||.:|..||..       :||...||..     ...|..|..|:    |:.|:.   ::.|.:.
  Fly    28 TLDQEPLPDLCQ-------SVKCPPDAEMQCPADSSIRHNLLAVDLIKSNAVELP---NASEMAS 82

  Fly   677 LQKAVSVCERLLANEKLGDCIKPFNYDALIRTCMADYCNCANREHPESCNCDAIAMLAKECAFKG 741
            ....||....|:::|....|.  .|...:.:||....|       |...:.|.:.          
  Fly    83 AADGVSYNRGLISDEDYVQCC--LNRKCVCKTCYIPDC-------PSDADEDVVV---------- 128

  Fly   742 IKLEHGWRNLEICPIS-------CGFGRVYQACGPNVEPTC----DSDLALPASKGACNEGCFCP 795
                     :|:.|.:       ||   .|:.   ..||.|    |:|......   |.. |.|.
  Fly   129 ---------VELVPENNQTPGECCG---TYEC---QAEPNCTVVRDTDFHWLKQ---CRR-CKCE 174

  Fly   796 EGTVQYKEACITRE--LCPCSLRGKEFKPESTVKKNCNTCTCKNGQWRCTEDKCG---------- 848
            .|.....:.|..|.  :|...:.|..:|......:||.||.|:.|:.:||...||          
  Fly   175 SGLKICHKTCDERAEGVCQSKISGMFYKDGENWTENCKTCECEKGEPKCTMSFCGNLNCPSEQQV 239

  Fly   849 -----------ARCGAVGDPHYQTFDGKRYDFMGKCSYH--------LLKTQNTSVEAENVACSG 894
                       .:|..:  ||.:..||...|::.:....        |.....|...||.||.|.
  Fly   240 MLKDTCCPVCWPKCAPM--PHEKQDDGSYEDYVDESETPEEDSLPPLLPDPLTTQQSAELVATST 302

  Fly   895 AVSES 899
            ..|.:
  Fly   303 TTSSN 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmlNP_524060.2 VWD 485..636 CDD:295339 6/14 (43%)
C8 680..754 CDD:285899 12/73 (16%)
TIL 758..811 CDD:280072 14/58 (24%)
VWD 840..1015 CDD:214566 18/89 (20%)
C8 1054..1121 CDD:214843
TIL 1131..1185 CDD:280072
TIL 1245..1298 CDD:280072
VWD 1327..1498 CDD:214566
C8 1535..1609 CDD:214843
Mucin2_WxxW 1751..1837 CDD:290069
TIL 1938..2005 CDD:280072
FA58C 2089..2223 CDD:238014
FA58C 2104..2225 CDD:214572
FA58C <2299..2404 CDD:214572
FA58C <2299..2403 CDD:238014
VWD 2703..2858 CDD:295339
C8 2893..2970 CDD:285899
TIL 2974..3030 CDD:280072
VWD 3035..3198 CDD:295339
C8 3257..3313 CDD:285899
VWC 3397..3451 CDD:302663
GHB_like <3755..3813 CDD:304424
CG13252NP_649248.3 VWC 197..249 CDD:302663 12/51 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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