DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hml and H13N06.2

DIOPT Version :9

Sequence 1:NP_524060.2 Gene:Hml / 39529 FlyBaseID:FBgn0029167 Length:3843 Species:Drosophila melanogaster
Sequence 2:NP_510558.2 Gene:H13N06.2 / 181636 WormBaseID:WBGene00010396 Length:454 Species:Caenorhabditis elegans


Alignment Length:377 Identity:85/377 - (22%)
Similarity:142/377 - (37%) Gaps:111/377 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  2519 PCPKHQRLCPSSGDCIPEILWCNGVQDCADDEDASCSDSFTVEPDVSREKNETEVITCPVPVCPP 2583
            |.|..|....||           |:...::.|:.:.:.:.||      ..:..|::|  :.|...
 Worm   105 PAPPPQSSAESS-----------GLPSSSEQEEEASAQNTTV------PSSTEELMT--LGVTET 150

  Fly  2584 QMKIRITEKKSRKMSKMFTFSKQVSIVDDGTTITKTKFISSKEQILAMPNR-----------ELD 2637
            .||   |||..:.:.|:.:     .:.:|   |||...||..|::|.:.:.           ||.
 Worm   151 NMK---TEKPDKGVLKILS-----PVFED---ITKIDNISDSEEVLRVNSENSVEGSGDNEPELM 204

  Fly  2638 FQLE------EQCDEFTCVPIPSKQVDKNETVTCTEPKCPEKYDVELDMSASKVGDCLRYSCVLR 2696
            ..||      ::..|||....|     ::.:||.|..| |....:....|::.....|:.|..:|
 Worm   205 TTLETTTTSSKKSSEFTTTMTP-----ESSSVTTTTAK-PVTEPITTSTSSTSATTTLKTSSKIR 263

  Fly  2697 PNKDDVCEI------SGKSFTTFDGTVFKYGPCSHILARDIHSSSWSISVHQQCSDE-------T 2748
               |:|...      :.::......|    ..|..||.. :.||.   :|.||...:       .
 Worm   264 ---DEVTTTMMPEMGNRRNLANLHPT----KECKDILFL-LDSSG---NVVQQYEKQKKYIEEIV 317

  Fly  2749 RKVCHKVITIQDTEAG--NELILLPHLKLKFNGYEFTVQQLINSPICKASFV--VSQPGKTLLAV 2809
            ||:.|.......|.||  .:.|::| |..:.||.:| :::|     .||.|:  |:..| ..::|
 Worm   318 RKLEHPRRMALITFAGRTRQKIVIP-LPEEPNGKKF-IEKL-----RKARFLRGVTAAG-AAISV 374

  Fly  2810 STKY---------------GFWVQLDDIGIVKVGISSKFIRTVDGLCGYYNG 2846
            :|:|               ||  ..||     |...|:.:|.|.|:..:..|
 Worm   375 TTQYVLQKSRHVQVVVVTDGF--SFDD-----VEKQSEALRAVVGMETFVTG 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmlNP_524060.2 VWD 485..636 CDD:295339
C8 680..754 CDD:285899
TIL 758..811 CDD:280072
VWD 840..1015 CDD:214566
C8 1054..1121 CDD:214843
TIL 1131..1185 CDD:280072
TIL 1245..1298 CDD:280072
VWD 1327..1498 CDD:214566
C8 1535..1609 CDD:214843
Mucin2_WxxW 1751..1837 CDD:290069
TIL 1938..2005 CDD:280072
FA58C 2089..2223 CDD:238014
FA58C 2104..2225 CDD:214572
FA58C <2299..2404 CDD:214572
FA58C <2299..2403 CDD:238014
VWD 2703..2858 CDD:295339 40/176 (23%)
C8 2893..2970 CDD:285899
TIL 2974..3030 CDD:280072
VWD 3035..3198 CDD:295339
C8 3257..3313 CDD:285899
VWC 3397..3451 CDD:302663
GHB_like <3755..3813 CDD:304424
H13N06.2NP_510558.2 vWFA 290..442 CDD:381780 38/149 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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