DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hml and Y69H2.3

DIOPT Version :9

Sequence 1:NP_524060.2 Gene:Hml / 39529 FlyBaseID:FBgn0029167 Length:3843 Species:Drosophila melanogaster
Sequence 2:NP_001360619.1 Gene:Y69H2.3 / 180221 WormBaseID:WBGene00013481 Length:826 Species:Caenorhabditis elegans


Alignment Length:1040 Identity:212/1040 - (20%)
Similarity:319/1040 - (30%) Gaps:382/1040 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1130 KCPLGQVFDECGDGCALSCDDLPSKGSCKRECVEGCRCPHGEY-VNEDGECVPKKMCHCNFDGMS 1193
            :|...:.|..||..|..:| .||:...|..:||.||:|..|.: ...|..||.:|.|:.      
 Worm    25 ECKENESFQTCGTACEPTC-GLPTPTFCTLQCVMGCQCNSGFFRRTSDNRCVEQKDCNV------ 82

  Fly  1194 FRPGYKEVRPGEKFLDLCTCTDGVWDCQDAEPGDKDKYPPSSELRSKCAKQPYAEFTKCAPKEPK 1258
               ...|..|........||                   |.:|:.::| ..|..| .||..|.  
 Worm    83 ---AANETIPIPPPATNLTC-------------------PVNEVSNEC-HNPCTE-KKCPQKN-- 121

  Fly  1259 TCKNMDKYVADSSDCL----PGCVCMEGYVYDTSRLACVLPANC---------------SCHHAG 1304
                     |...:||    .||.||:|:|.:...: ||..|.|               .||:| 
 Worm   122 ---------APQVNCLMACQVGCSCMDGFVRNNQGV-CVKEAECPAIGSQTCGTNEEPNQCHNA- 175

  Fly  1305 KSYDDGEKIK--------EDCNL-CECRAG-----------NWKCSKNGCESTCSVWGDSHFTTF 1349
             .::....:|        |.|:: |.|:.|           ..:|...|...|||...:.:    
 Worm   176 -CFEKKCPVKPQPLVNCMEKCDIGCSCKKGFLRNRQGQCVNPTECPATGSTLTCSKNEEPN---- 235

  Fly  1350 DGHDFDFQGAC-----DYV-----------LAKGVFDNGDGFSITIQNVLCGTMGVTCSK--SLE 1396
            |.|:...:..|     .:|           ..||:..|..|..:.:..  |...|.|.:.  :|.
 Worm   236 DCHNSCSEAKCPVNPQPFVRCMMRCEKACSCKKGLVRNRQGQCVKLAE--CPPTGKTDTNPCALV 298

  Fly  1397 IALTGHAEESLLLSADSAY----STDPNKTPIKKLRDSVNSKGHNAFHIYKAGVFVVVEVIPLKL 1457
            :...||   ...:|...|.    |||.|...:...|     .||                     
 Worm   299 LCKPGH---RCTMSTGQATCVPGSTDENPCNLVDCR-----TGH--------------------- 334

  Fly  1458 QVKWDEGTRVYVKLGNEWRQKVSGLCGNYNGNSLDDMQTP------SMGLETSPMLFGHAWKLQP 1516
            |.....|....|.   ::....|.|... ||:.::...||      |.|.|        ..::|.
 Worm   335 QCSMSTGKPTCVP---DYSDTPSPLFPG-NGSDINIQITPCSTMKCSAGTE--------CMEVQK 387

  Fly  1517 HCSAPVAPIDACKKHPERETWAQLKCGALKSDLFKECHAEVPLERFWKRCIFDTCACDQGGDCEC 1581
            :|:.|                   .||                  |...|: :|.....||....
 Worm   388 NCTEP-------------------PCG------------------FQGVCV-NTTEVPVGGCATM 414

  Fly  1582 LCTAVAAYADA---CAQKGINIRWRSQHFCPMQCDPHCSDYKACTP-------ACAVETCDNFLD 1636
            .|:|.....:|   ||:            .|      |..:.||.|       :||..||.    
 Worm   415 RCSAGTTCQEALVKCAK------------AP------CPSHAACIPNSNETLSSCAAVTCP---- 457

  Fly  1637 QGIAERMCNRENCLEGCHIKPCEDGFIYLNDTYRDCVPKAECKPVCMVRDGKTFYEGDITFTDSC 1701
              :.| :|.  ..|..|.::||.              |...|.|:     ..|......|....|
 Worm   458 --VGE-ICT--ETLVQCFVEPCP--------------PLVSCTPI-----NSTVINSTTTSDSGC 498

  Fly  1702 ATCRCSKRKEICSGVKCDVPATTGLPAPLVEGTTLPTPLATQNQTKCVKGWTRWCDKDRDTSDKS 1766
            |:..|.      .|.:|:......|.||..:..:.......||.|.     .:.||..|..::: 
 Worm   499 ASVSCP------VGERCEETTMACLMAPCPKAVSCVPMNGNQNSTA-----RQGCDVVRCRANE- 551

  Fly  1767 VRLNDEEKVPRYDRMENVYGTCLKQYMTKVECRVKDTHEAPEQMDENVVCSLEEGLR-CIGKCHD 1830
              :.:|:||      :.|...|..|........:..|..||     ...|:..:.:. |:.    
 Worm   552 --VCEEQKV------DCVKAPCPMQVACVSIVHLNSTTPAP-----GSTCAKNQTMSDCLN---- 599

  Fly  1831 YELRAFCQCDEELEPELPKP---TEKPQLGLACDAAVVEYKEFPGDCHKFLHCQPKGVEGGWIYV 1892
                   .|.|:..|.:.|.   |:....|.||.:..:...:  |:|:|...|.|:         
 Worm   600 -------TCSEDKCPGMSKSMMCTKHCGQGCACASGYLRSSD--GECYKPKDCPPE--------- 646

  Fly  1893 EKTCGEYMMFNPTMLICDHIA-TVTEIKPNCGLKPEPEPEFEPIKQ---CPPGKIK--------S 1945
               ||:...:.     |:..| |....:|||     |.|:.:..|:   |.||.:|        :
 Worm   647 ---CGQNEEYR-----CEKCAGTCKNPEPNC-----PGPKNKSCKRACICAPGFVKKNGKCVTLA 698

  Fly  1946 ECANQ------CENTCHYYGSILKKRGLCQVGEHCK---------PGCVDELRPDCPKLGKFWRD 1995
            .|.:.      |..|..|...:.|.:.||...:.|:         ||||  .||:. ||.    .
 Worm   699 SCPDHDHTNITCLGTQEYTDCMPKCQQLCSGAQQCETGMEIAMCTPGCV--CRPNY-KLD----S 756

  Fly  1996 EDTCVHADECPCMDKAEHYVQPHKPVLGEFEVCQCIDNA--FTCVPNKPEPVPKDEDDDLDLVSV 2058
            ...|||...|                   |:..:|.||.  ..|:.|         |:..||.|:
 Worm   757 NGDCVHNRHC-------------------FKTTECPDNEEWSKCLSN---------DNQCDLASI 793

  Fly  2059  2058
             Worm   794  793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmlNP_524060.2 VWD 485..636 CDD:295339
C8 680..754 CDD:285899
TIL 758..811 CDD:280072
VWD 840..1015 CDD:214566
C8 1054..1121 CDD:214843
TIL 1131..1185 CDD:280072 19/54 (35%)
TIL 1245..1298 CDD:280072 17/56 (30%)
VWD 1327..1498 CDD:214566 37/198 (19%)
C8 1535..1609 CDD:214843 12/76 (16%)
Mucin2_WxxW 1751..1837 CDD:290069 14/86 (16%)
TIL 1938..2005 CDD:280072 23/89 (26%)
FA58C 2089..2223 CDD:238014
FA58C 2104..2225 CDD:214572
FA58C <2299..2404 CDD:214572
FA58C <2299..2403 CDD:238014
VWD 2703..2858 CDD:295339
C8 2893..2970 CDD:285899
TIL 2974..3030 CDD:280072
VWD 3035..3198 CDD:295339
C8 3257..3313 CDD:285899
VWC 3397..3451 CDD:302663
GHB_like <3755..3813 CDD:304424
Y69H2.3NP_001360619.1 TIL 26..80 CDD:366828 19/54 (35%)
TIL 99..155 CDD:366828 21/88 (24%)
TIL 163..219 CDD:366828 9/57 (16%)
TIL 228..284 CDD:366828 10/61 (16%)
TIL 588..643 CDD:366828 13/67 (19%)
TIL 710..766 CDD:366828 18/62 (29%)
TIL 772..826 CDD:366828 9/31 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D8946at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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