DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hml and B0507.1

DIOPT Version :9

Sequence 1:NP_524060.2 Gene:Hml / 39529 FlyBaseID:FBgn0029167 Length:3843 Species:Drosophila melanogaster
Sequence 2:NP_001379585.1 Gene:B0507.1 / 179256 WormBaseID:WBGene00015218 Length:615 Species:Caenorhabditis elegans


Alignment Length:792 Identity:157/792 - (19%)
Similarity:226/792 - (28%) Gaps:335/792 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly  3007 CFPGCYCPEGTVRK-----------GPNCVP-------ISEC-KDCVCNS-LGASKYMTYDRKSF 3051
            |..|.:|.||..||           |..|.|       .|.| |..|..| ||.:.      :.|
 Worm    35 CGRGFFCQEGACRKDSCSNDLQCDEGEECRPGNVNGRQKSGCFKSLVPKSALGGTS------EDF 93

  Fly  3052 SFNGNCTYLLSRDVVLPGVHTFQVYVSMDDCKKLGQPTPVEGGSCAKSLHILNGDHVIHVQRVPQ 3116
            ...|..       :||....|..:....:||               .|.||.|..|.:...::|.
 Worm    94 CPGGGA-------LVLSPTGTLTICDLTEDC---------------PSTHICNPVHGVCCTKLPT 136

  Fly  3117 KPKSLQVLVDGFEVKKIPYKDSWISLRQVVGKELVLSLPESHVELTASFEDLIFSLGVPSIKYGS 3181
            .||:.:.:|:                 .:.||.::....:..|            :..|...:..
 Worm   137 CPKTKKTMVN-----------------FITGKPIMCQFKQGRV------------MPCPENGFCE 172

  Fly  3182 KMEGLCGDCNGNAGNDLQPNPAKKKAGVDVIQSWQADEPKLGLVEECLSEDVPKEHCIPLPPEKD 3246
            ...|.|  |  ..|.|::| |........:|::   :.|..|.|            |.|      
 Worm   173 TTTGFC--C--VPGVDVEP-PVVVTRAPAIIEN---ERPWRGQV------------CSP------ 211

  Fly  3247 PCLQFYNAELFGKCPLAVDPIAYVSACQQDICKPGNTQQGVCVALAAYAKECNQHGICTNWRRPQ 3311
                                        |..|..|    ..|:        |...|.|       
 Worm   212 ----------------------------QSGCSGG----AACI--------CGARGNC------- 229

  Fly  3312 LCPYECPSDMVYEPCGCAKNCDTIKALSEFDAVSLKNEAVVHTVKTDEMCLSSERFE-----GCF 3371
            :|  ||.:|..|......|.|..::.       .||.:.     |||..|  |..|.     ||.
 Worm   230 MC--ECATDFGYTLASDGKTCQRVRR-------RLKEKC-----KTDMEC--SAAFSECSSGGCR 278

  Fly  3372 CPPG--KVMDGG------QCVPEIACTKCDDGLHLPDEKWKKDKCTECQCDSKGK-----TTCVE 3423
            |..|  :..|||      :||.:.|..|.|:.|              ..|..|..     :|...
 Worm   279 CKRGFKRNGDGGCEPLEYRCVNKAAPLKRDEKL--------------ITCSLKNSLLSSVSTSFR 329

  Fly  3424 --KKCQVEENI-------CAEGYRPETIVSV----DECCPRYRCVPETKDPSKLCLAPLVPICGP 3475
              ||.:...:|       ..:|.:..|::..    |:|...:.|||...|.||           |
 Worm   330 SLKKSENGSDINDAEFERLMKGIQNGTLLDFGNERDDCPDEHYCVPVFDDASK-----------P 383

  Fly  3476 GQFKKEKKDVNGCSQYICECIP-----KDQCEIIELRELLPGEIIVNVEEGC--CP--------- 3524
            |.:|.             .|.|     :..|.:.|     |.|.....:.||  ||         
 Worm   384 GYYKG-------------FCCPSPSEIRPTCPVGE-----PHESSYPPDYGCNKCPVDYYCHRDS 430

  Fly  3525 --TQKIECKPETCPKAPVNCQERFYEVKTIKEPGMCCSK----HSCVPPKDLCIVQYELDEATKF 3583
              |:|..|    |||..|:.::.::|       |.|.|.    .|| .....|:.....|.|.::
 Worm   431 VATEKSIC----CPKPCVSLEDIYHE-------GQCFSMAYYGDSC-HISSQCVYSKSPDAAEEY 483

  Fly  3584 TKTVGDKWTHAKEVCKQETCSYGPDGNAQVVSTLEQCLTDCAPGFSYQNLDKTKCCGKCVQTSCI 3648
            .:.       ||..|.:..||                   |..||||.:       |:|.:..| 
 Worm   484 AEV-------AKMECARSICS-------------------CPAGFSYAD-------GQCKRIMC- 514

  Fly  3649 FEQKLYEVNALWKSADNCTTYSCLKKDGQFLVTTSREVCPDVGSC-LSHLLYQDG--CCK---RC 3707
                          :........:.|.||.:      .|.....| :.|:...:.  |||   ||
 Worm   515 --------------SIGLRGEPSVDKSGQLI------RCERSSDCSMGHMCDPNTHVCCKGTNRC 559

  Fly  3708 KSEPLVEDKSSC 3719
            ..: .||....|
 Worm   560 PKD-YVETGEQC 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmlNP_524060.2 VWD 485..636 CDD:295339
C8 680..754 CDD:285899
TIL 758..811 CDD:280072
VWD 840..1015 CDD:214566
C8 1054..1121 CDD:214843
TIL 1131..1185 CDD:280072
TIL 1245..1298 CDD:280072
VWD 1327..1498 CDD:214566
C8 1535..1609 CDD:214843
Mucin2_WxxW 1751..1837 CDD:290069
TIL 1938..2005 CDD:280072
FA58C 2089..2223 CDD:238014
FA58C 2104..2225 CDD:214572
FA58C <2299..2404 CDD:214572
FA58C <2299..2403 CDD:238014
VWD 2703..2858 CDD:295339
C8 2893..2970 CDD:285899
TIL 2974..3030 CDD:280072 11/40 (28%)
VWD 3035..3198 CDD:295339 27/163 (17%)
C8 3257..3313 CDD:285899 7/55 (13%)
VWC 3397..3451 CDD:302663 10/71 (14%)
GHB_like <3755..3813 CDD:304424
B0507.1NP_001379585.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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