DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hml and cv-2

DIOPT Version :10

Sequence 1:NP_524060.2 Gene:Hml / 39529 FlyBaseID:FBgn0029167 Length:3843 Species:Drosophila melanogaster
Sequence 2:XP_061504823.1 Gene:cv-2 / 1276836 VectorBaseID:AGAMI1_002952 Length:737 Species:Anopheles gambiae


Alignment Length:633 Identity:142/633 - (22%)
Similarity:216/633 - (34%) Gaps:218/633 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   658 QVENSAEMEFGMDSCEQSKLQKAVSV-CERLLANEKLGDCIKPFNYDALIRTCMA-DYCNCANRE 720
            |...||.:....:.|.....:..:|: |.:.:......:|.:        .:|.| |.|....::
Mosquito    26 QATASASLSGYREPCTNEGEEVRISMPCFKCICKNGFVECEQ--------ESCPAVDDCYIYKKK 82

  Fly   721 HPESCNCDAIAMLAKECAFKGIKLEHG--W----------------------------------R 749
            .|:.| ||...    .|.::|..::.|  |                                  |
Mosquito    83 GPDEC-CDKCI----GCLYQGRHIDSGTEWTDPDDPCMHYKCVSGVVTRSEMKCYAPCSDPSPPR 142

  Fly   750 NLEICPISCG--------FGRVYQACGPNVEPTCDSD-----------LALPASK---------G 786
            ..:.||...|        .|....:..|.|:.||...           |..|.||         .
Mosquito   143 KGQCCPTCLGCRLNGQKVLGEATLSEDPCVKCTCSGHKLTCTKRSCPVLQCPLSKQIRTPGECCP 207

  Fly   787 ACNE-------------------------------GCFCPEGT-VQYKEACITREL--------- 810
            .||:                               .|.|..|| |..|..|...|.         
Mosquito   208 RCNDRREEIHRGSPLCILGKAVHFPGKPYHGDQCSNCTCQNGTSVCEKSTCPILECALEDQQREP 272

  Fly   811 ------CP--------CSLRGKEFKPESTVKKN-CNTCTCKNGQWRCT-----EDKCG------- 848
                  ||        |:..||.::...|...| |.:|.|:.|:.||.     :.|||       
Mosquito   273 GECCPSCPMPAEFRSTCAAAGKVYQNNETWSLNACTSCECRAGEVRCANIQCPKKKCGPNETLLS 337

  Fly   849 -------------ARCGAVGDPHYQTFDGKRYDFMGKCSYHLLKTQNTSVEAENVACSGAVSESM 900
                         |.|...|||||:||||..|.|.|.|.|.|              .:..|..:.
Mosquito   338 VSGECCPRCVESPAVCTVFGDPHYKTFDGNFYSFQGSCKYQL--------------TADCVGHTF 388

  Fly   901 NFAAPDD------PSCTKAVTIRFILRDGTPSVIKLDQGLTTIVND---KPIAKLPKMLGLGEVL 956
            :....:|      .|.||.||::.   :|..  :.|...:...||.   :|..:|.:.|.:.   
Mosquito   389 SIRVTNDARLTKYSSWTKTVTLKL---EGVK--VNLGHRMRVKVNGTRVEPPYRLNQTLDIH--- 445

  Fly   957 IRRASSTFLTVEFADGIRVWWDGVSRVYIDAPPSLRGQTQGLCGTFNSNTQDDFLTPEG-DVETA 1020
             |.|..|.:.||.|.|:::.|||::.:.:..|.:.:|:..||||.:||..:||..|..| ::...
Mosquito   446 -RSADGTEVIVETALGVKLSWDGLNFIQVQVPTAYKGKLCGLCGNYNSIFRDDLFTRAGLNMTHN 509

  Fly  1021 VEPFADKWRTKDTCQFKAETHQGPHPCTLNPEKKAQAE----------KFCDWI-LQDIFQDCHF 1074
            |..||..|..           .||..||...:|:..|.          ..|..: ..::|..|:.
Mosquito   510 VWRFARSWAV-----------GGPKACTRQRKKELAARHPQCKTKKLYPLCKPLRTAEVFGRCNS 563

  Fly  1075 LVEPEQFYEDCLYDTCACKDEMSKCFCPILSAYGTECMRQGVK-TGWR 1121
            |:.|:.::..|.:|.|.|...  :|:|..::||..||:||||: ..||
Mosquito   564 LLNPDNYFASCKFDMCECPHR--QCYCDSMAAYAHECVRQGVQLPDWR 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmlNP_524060.2 VWD 485..636 CDD:459671
C8 684..754 CDD:462584 15/106 (14%)
TIL 758..811 CDD:410995 20/127 (16%)
VWD 840..1015 CDD:214566 57/208 (27%)
C8 1054..1121 CDD:214843 20/78 (26%)
TIL 1131..1185 CDD:410995
TIL 1245..1298 CDD:460351
VWD 1327..1498 CDD:214566
C8 1535..1609 CDD:214843
TIL 1938..2005 CDD:473303
FA58C 2089..2223 CDD:238014
FA58C <2299..2403 CDD:238014
VWD 2703..2858 CDD:459671
TIL 2974..3030 CDD:460351
VWD 3035..3198 CDD:459671
C8 3248..3313 CDD:462584
VWC 3397..3451 CDD:450195
GHB_like <3755..3813 CDD:473907
cv-2XP_061504823.1 None
Blue background indicates that the domain is not in the aligned region.

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