DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hml and LOC110439905

DIOPT Version :9

Sequence 1:NP_524060.2 Gene:Hml / 39529 FlyBaseID:FBgn0029167 Length:3843 Species:Drosophila melanogaster
Sequence 2:XP_021333306.1 Gene:LOC110439905 / 110439905 -ID:- Length:699 Species:Danio rerio


Alignment Length:754 Identity:150/754 - (19%)
Similarity:235/754 - (31%) Gaps:236/754 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1494 MQTPSMGLETSPMLFGHAWKLQPHCSAPVAPIDACKKHPERETWAQLKCGALKSDLFKECHAE-- 1556
            :.|.|.|:.|.|:....::....:.|....|   .|..|   |:...|.|...|.....||..  
Zfish     9 LTTVSGGMSTPPITKSTSFISSTNTSTSTTP---SKTSP---TFTTSKTGTFTSSPECNCHWSDW 67

  Fly  1557 ---------------VPLERFWKRCIFDTCACDQGGDCECLCTAVAAYADACAQKGINIRWR--- 1603
                           ||:|...|  .|..|:..:    |..|.|........:|.|..|:..   
Zfish    68 NDFGGLTTGPDGGEIVPIETITK--TFHVCSTPK----ELQCRAKRYPGVPVSQLGQVIKCNTID 126

  Fly  1604 -----SQHFCPMQCDPHCSDYKACTPACAVETCDNFLDQ----GIAERMCNRENCLEGCHIKPCE 1659
                 ::|   ......|.||:. ...|..|.|.|...|    ..|....:.:..::.....|. 
Zfish   127 GLVCLNRH---QGLTQQCYDYEV-RLFCCDENCGNITTQTSSTDPATMSTSTKETVQSSASGPS- 186

  Fly  1660 DGFIYLNDTYRDCVPKAECKPVCMVRDGKTFYEGDITFT---------DSCATCRCSKRKEICSG 1715
                  |.|....:.:|...|..     .|.....:|.|         .|.:|...::|      
Zfish   187 ------NPTTTQAISRATPLPAF-----STVMSTPLTETTSVQNYSSFTSISTTTTTER------ 234

  Fly  1716 VKCDVPATTGLPAPLVEGTTLPTPLATQNQTKCVKGWTRWCDKDRDTSDKSVRLNDEEKVPRYDR 1780
              ...|:|...|:..::.:||   ::|..   |...|:.|.|....|:..    :..|.:.....
Zfish   235 --ISTPSTIDSPSSTMKTSTL---ISTSG---CNCHWSDWSDHGGSTTGP----DGGEVISIETI 287

  Fly  1781 MENVYGTCLKQYMTKVECRVKDTHEAP-EQMDENVVCSLEEGLRCIGK-------CHDYELRAFC 1837
            :|:...||  ..:.:::||.|.....| .|:.::|.|:..:||.|:.|       |:||::|..|
Zfish   288 IESSSSTC--SAIKEIQCRAKRYPGVPLSQLGQDVKCNTIDGLVCLNKHQGLTQQCYDYDIRVLC 350

  Fly  1838 QCDEELEP------------------ELP-KPTEKPQLG-----LACDAAVVEYKEFP-----GD 1873
             |||..:.                  .|| .||...|:.     ::.|.::......|     ||
Zfish   351 -CDENCDNITTQTFSTAPTTLSSTSFNLPSSPTSTVQISSSVSVISTDTSIKTPTSMPLTTVSGD 414

  Fly  1874 CHKFLHCQPKGVEGGWIYVEKTCGEYMMFNPTMLICDHIA---TVTEIKPNCGLKPEPEPEFEPI 1935
                 ...|                     ||.....||:   |.|...|:     :..|.|..:
Zfish   415 -----KSSP---------------------PTTTFTSHISSTNTSTSTTPS-----KTSPTFTTL 448

  Fly  1936 KQCPPGKIKS--ECANQCENTCHY-----YGSILKKRGLCQVGEHCKPGCVDELRPDCPKLGKFW 1993
            |   .|...|  ||      .||:     :|.:                   ...||..::....
Zfish   449 K---TGTFTSSPEC------NCHWSDWNDFGGL-------------------TTGPDGGEIVPIE 485

  Fly  1994 RDEDT---CVHADECPCMDKAEHYVQPHKPV--LGEFEVCQCIDNAFTCVPNKPEPVPKDEDDDL 2053
            |..:|   |....|..|  :|:.|  |..|:  ||:...|..|| ...|: |:.:.:.:...|  
Zfish   486 RITETFYLCSTPKEVQC--RAKRY--PGVPLAQLGQVIKCNTID-GLVCL-NRHQGLTQQCYD-- 542

  Fly  2054 DLVSVVPIYPVTLTPPLQCSPERLIPKIENPAHSLPDSIFNASSQLAPEHGPKMARLTKEQPRGS 2118
                    |.:.|.    |..|..            |:|...:|...|   ..|:..||:..:.|
Zfish   543 --------YEIRLF----CCDENC------------DNITTQTSSTDP---ATMSTSTKQTVQSS 580

  Fly  2119 WS-PSINDQMQYLELNFAKPEPFYGV--VMAGSPEFDNY 2154
            .| ||.....|.:....|.|....||  .:..:....||
Zfish   581 ASGPSNPTTTQAMPTATALPALSTGVTTTLTETTSVQNY 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmlNP_524060.2 VWD 485..636 CDD:295339
C8 680..754 CDD:285899
TIL 758..811 CDD:280072
VWD 840..1015 CDD:214566
C8 1054..1121 CDD:214843
TIL 1131..1185 CDD:280072
TIL 1245..1298 CDD:280072
VWD 1327..1498 CDD:214566 1/3 (33%)
C8 1535..1609 CDD:214843 19/98 (19%)
Mucin2_WxxW 1751..1837 CDD:290069 23/93 (25%)
TIL 1938..2005 CDD:280072 12/76 (16%)
FA58C 2089..2223 CDD:238014 18/69 (26%)
FA58C 2104..2225 CDD:214572 14/54 (26%)
FA58C <2299..2404 CDD:214572
FA58C <2299..2403 CDD:238014
VWD 2703..2858 CDD:295339
C8 2893..2970 CDD:285899
TIL 2974..3030 CDD:280072
VWD 3035..3198 CDD:295339
C8 3257..3313 CDD:285899
VWC 3397..3451 CDD:302663
GHB_like <3755..3813 CDD:304424
LOC110439905XP_021333306.1 Mucin2_WxxW 63..150 CDD:315900 17/96 (18%)
Mucin2_WxxW 262..350 CDD:315900 23/93 (25%)
Mucin2_WxxW 462..549 CDD:315900 23/125 (18%)
SSL_OB <552..>671 CDD:332684 19/83 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D12226at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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