DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hml and LOC108647331

DIOPT Version :9

Sequence 1:NP_524060.2 Gene:Hml / 39529 FlyBaseID:FBgn0029167 Length:3843 Species:Drosophila melanogaster
Sequence 2:XP_031757168.1 Gene:LOC108647331 / 108647331 -ID:- Length:1160 Species:Xenopus tropicalis


Alignment Length:1499 Identity:311/1499 - (20%)
Similarity:491/1499 - (32%) Gaps:478/1499 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  2436 STTGCQC--QDQLFWDGNTCVQHNLCPCIENYVSYPIGSKFENSACEDCVCVLGGHKNCKP---- 2494
            :||.|.|  :.:::..|:...:.:              |:..:..|...||    .:|||.    
 Frog     9 TTTTCACYHEGRVYMPGDEIARSD--------------SRERDGKCYSHVC----EENCKKTSRI 55

  Fly  2495 ----KKCPPCLGGKLRPVITSDCFCKCEPCPKHQRLCPSSGDCIPEILWCNGVQDCADDEDASCS 2555
                ::.||.......|..|:.|.|      .|:......||.|        .:..:.:.|..|.
 Frog    56 ETPCERTPPPPPTTTPPPTTTTCAC------YHEGRVYMPGDEI--------ARSDSRERDGKCY 106

  Fly  2556 DSFTVEPDVSREKNETEVITCPVPVCPPQMKIRITEKKSRKMSKMFTFSKQVSIVDDGTTITKTK 2620
            .....|......:.||.....|.|  ||                        :.....||.|...
 Frog   107 SHVCEENCKKTSRIETPCERTPPP--PP------------------------TTTPPPTTTTCAC 145

  Fly  2621 FISSK-----EQILAMPNRELDFQ-----LEEQCDEFTCVPIPSKQVDKNETVT--CTEPKCPEK 2673
            :...:     ::|....:||.|.:     .||.|.:.:.:..|.::.....|.|  .|...|...
 Frog   146 YHEGRVYMPGDEIARSDSRERDGKCYSHVCEETCKKTSRIETPCERTPPPPTTTPPPTTTTCACY 210

  Fly  2674 YDVELDMSASKVGDCLRYSCVLRPNKDDVCEISGKSFTTFDGTVFKYGPCSHILARDIHSSSWSI 2738
            ::..:.|...::.            :.|..|..||.:             ||:            
 Frog   211 HEGRVYMPGDEIA------------RSDSRERDGKCY-------------SHV------------ 238

  Fly  2739 SVHQQCSDETRKVCHKVITIQDTEAGNELILLPHLKLKFNGYEFTVQQLINSPICKASFVVSQPG 2803
                 |.:..:|...                                  |.:| |:.:.....|.
 Frog   239 -----CEENCKKTSR----------------------------------IETP-CERTPPTPPPK 263

  Fly  2804 KTLLAVSTKYGFWVQLDDIGIVKVGISSKFIRTVDGLCG-------YYNGNQ--KDDKRSPDGQI 2859
            .|.|..:|                            .|.       |..|::  :.|.|..||:.
 Frog   264 TTPLLTTT----------------------------TCACHHEGRMYMPGDEIARSDSRERDGKC 300

  Fly  2860 IPNTEKFGDSWYDKRIPKDQCGDLKC----PREMQAKALQLC-NIIHHPTFARCHKAVNYKQFLN 2919
            ..:.       .||...|.......|    |.....|::... .:..|.|...||.  |.|.::.
 Frog   301 YSHV-------CDKTCKKPTRIQTPCERTPPTPPSTKSVTTTPPVTTHGTKCSCHH--NGKVYMP 356

  Fly  2920 ----------NYCLEAACN------------CMMANNGDPAACKC-----------------NIL 2945
                      ..|.:..|:            |.......|...|.                 ...
 Frog   357 GEEVTRSTVLGKCYKVICDGSCGEIPAIEIPCTTTPTTTPTTTKTTTQTTTPSSTPKTTTKPTTK 421

  Fly  2946 ESFVKKCLSVNPLVQLTTWRAVAQCEINCPSPLV----HTDCYKRRCEP----SCDN-----VHG 2997
            .:.:....:..|.|..|:|:.     .||...:.    |.|..::.|.|    :|.|     ...
 Frog   422 PTTITTISTATPCVPHTSWQV-----FNCTKAVCNSAGHLDIVQKSCTPPPAITCANKMKPIAVP 481

  Fly  2998 DDCPVLPDACFPGCY---CPEGTVRKGPNCVPISECKDCVCNSLGASKYMTYDRKSFSFNGNCTY 3059
            ||     |:|   |:   ||                  |||:..| ..::|:|...:::.|:|:|
 Frog   482 DD-----DSC---CWHWECP------------------CVCSGWG-DHHLTFDGTYYAYQGSCSY 519

  Fly  3060 LLSRDVVLPGVHTFQVYVSMDDCKKLGQPTPVEGGSCAKSLHILNGDHVIHVQRVPQKPKSLQVL 3124
            :|..::| ..|..|.:|:...||   |..:   |.:|.:.|.:.:....|.:......|.||:..
 Frog   520 VLMEEIV-KTVDNFGIYLDNYDC---GDKS---GINCPRKLTVRHKTREITISPKTVSPISLETH 577

  Fly  3125 VDGFEVKKIPYKDSWISLRQVVGKELVLSLPESHVELTASFEDLIFSLGVPSIKYGSKMEGLCGD 3189
            |:| .:..:||....:::.| .|..||:.:||.|..:|  :..|.:::.:|..|:.:...|.||.
 Frog   578 VNG-NLVLLPYTKYGVNIYQ-SGVYLVVEIPELHTNVT--YNGLTYTVEMPYGKFYNNTHGQCGT 638

  Fly  3190 CNGNAGND-LQPNPAKKKAGVDVIQSWQADEPKLGLVEECLSEDVPKEHCIPLPPE-----KDPC 3248
            |..|..:| :..|.......|.:..|:....|           |.|:  |..:||.     |...
 Frog   639 CTNNQADDFMMANGKITTNAVAMADSFMVHNP-----------DKPR--CKSIPPVHPKICKSTL 690

  Fly  3249 LQFYNAELFGKCPLAVDPIAYVSACQQDICKPGNTQQGVCVALAAYAKECNQHGICTNWR-RPQL 3312
            .......:|.||.....|..:..||..|.|...|: ...|.:|..||..|...|:|..|| ....
 Frog   691 CDLIMGPVFQKCHAFHSPEPFYQACLLDNCNKANS-NNECTSLQHYASICGDQGVCIQWRSHAST 754

  Fly  3313 CPYECPSDMVYEPCGCAK--NCDTIKALSEFDAVSLKNEAVVHTVKTDEMCLSSERFEGCFCPPG 3375
            ||:.|||:.||:.||.|.  .|.|:.|    ||::.:|:..|              .|||||..|
 Frog   755 CPFTCPSNKVYDACGPALPITCQTMPA----DAIAQQNDIRV--------------VEGCFCAKG 801

  Fly  3376 KV---MDGGQCVPEIACTKCDDGLHLPDEKWKKDKCTECQCDSKGK-TTCVEKKC-QVEENICA- 3434
            .:   .....||.:..|...|:......|.::.: |..|.|...|. .||..::| .|....|. 
 Frog   802 SMPFTTSTDVCVSDCGCIGPDNVPRKYGESFEFN-CETCTCLEGGSGITCERQQCHHVRNEECTR 865

  Fly  3435 EG-YRPETIVSVDECCPR--YRCVPETKDPSKLCLAPLVPICGPG-QFKKEKKDVNGCSQYICEC 3495
            || ||...|...::||..  .||     |||:...|  .|.|||| :.|...|:.:.|..|:|| 
 Frog   866 EGFYRVTEISPTNKCCEETVCRC-----DPSRCRNA--FPKCGPGFELKGGIKEGHCCPTYVCE- 922

  Fly  3496 IPKDQCEIIELRELLPGEIIVNVEEGCCPTQKIECKPETCPKAPVNCQERFYEVKTIKEPGMCCS 3560
             ||..| :....|.|||..:.:                      .||:                 
 Frog   923 -PKQVC-VSGNAEYLPGSHVYS----------------------DNCE----------------- 946

  Fly  3561 KHSCVPPKDLCIVQYELDEATKFTKTVGDKWTHAKEVCKQETCSYGPDGNAQVVSTLEQCLTDCA 3625
              :|:..:|                  |:.:|.|   |....|:                 ..|.
 Frog   947 --NCICAQD------------------GNNFTIA---CNPIVCN-----------------IHCP 971

  Fly  3626 PGFSYQNLDKTKCCGKCVQTSCIFE-----QKLYEVNALWKSADNCTTYSCLKKDGQFLVTTSRE 3685
            .||..:....:.|||.|.||:|:..     :.:...|.|....||||.|.|...:.||:.|.|:.
 Frog   972 AGFKVKKNSPSDCCGTCQQTNCVVNYDGSYRLMNPGNELPSMNDNCTMYKCSLINDQFITTVSQI 1036

  Fly  3686 VCPDV-------GSCLSHLLYQDGCCKRCKSEPLVEDKSSCLPVSLAESRTKEILKFPVQGHGTC 3743
            .||.:       ||.  | |..:|||:.|     ::.:|||...::.:..|       .||   |
 Frog  1037 SCPSLNEEDCEHGSI--H-LSPNGCCQTC-----IQKRSSCKIQAVDDYLT-------YQG---C 1083

  Fly  3744 VNADPIQGFTDCEGACSSGSKYNTLTDMHEKFCTCCSIKSYHPISVKMICDDGHTFTQKHEVPSN 3808
            .:...:: .:.|||:|.:.|.|::......|.|:||.........||:.|.||.....::.....
 Frog  1084 TSVRRLR-MSRCEGSCGTFSMYSSEQRAMSKKCSCCQEVQTARNKVKLQCPDGRIIDHEYIDVLE 1147

  Fly  3809 CGCS 3812
            |.|:
 Frog  1148 CKCA 1151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmlNP_524060.2 VWD 485..636 CDD:295339
C8 680..754 CDD:285899
TIL 758..811 CDD:280072
VWD 840..1015 CDD:214566
C8 1054..1121 CDD:214843
TIL 1131..1185 CDD:280072
TIL 1245..1298 CDD:280072
VWD 1327..1498 CDD:214566
C8 1535..1609 CDD:214843
Mucin2_WxxW 1751..1837 CDD:290069
TIL 1938..2005 CDD:280072
FA58C 2089..2223 CDD:238014
FA58C 2104..2225 CDD:214572
FA58C <2299..2404 CDD:214572
FA58C <2299..2403 CDD:238014
VWD 2703..2858 CDD:295339 20/163 (12%)
C8 2893..2970 CDD:285899 15/116 (13%)
TIL 2974..3030 CDD:280072 14/71 (20%)
VWD 3035..3198 CDD:295339 43/163 (26%)
C8 3257..3313 CDD:285899 18/56 (32%)
VWC 3397..3451 CDD:302663 17/57 (30%)
GHB_like <3755..3813 CDD:304424 17/58 (29%)
LOC108647331XP_031757168.1 VWD 486..652 CDD:214566 49/198 (25%)
C8 690..752 CDD:400886 18/62 (29%)
CT 1071..1154 CDD:214482 21/92 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D12226at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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