DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hml and LOC108181583

DIOPT Version :9

Sequence 1:NP_524060.2 Gene:Hml / 39529 FlyBaseID:FBgn0029167 Length:3843 Species:Drosophila melanogaster
Sequence 2:XP_021326301.1 Gene:LOC108181583 / 108181583 -ID:- Length:699 Species:Danio rerio


Alignment Length:757 Identity:205/757 - (27%)
Similarity:320/757 - (42%) Gaps:111/757 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 LCTTWGGINMKTFDGLVFKAPLSCSHTLITDKVSGTFDIILKACPYGSGYGCAHTLKILWQSVLY 548
            :|:||...:.|||||.:::.|..|.:.|::|..|..|.:.:|.....||           ..:..
Zfish     1 MCSTWESFHFKTFDGDIYQYPGLCEYNLVSDCTSKQFSVDVKRTQTSSG-----------PKISR 54

  Fly   549 TFENLNGTM--------QLTTPIKKLPMPVQVMGMKVMPVAQHVQIDLESVGLKLDWDHRQYVSV 605
            ...::||.|        .:...|.||  ||...|:.:.....:..| ....||.:.|.....|:|
Zfish    55 IVVSINGKMFSISENNVMIDDQITKL--PVYESGILIEENTIYTNI-RSKTGLTVMWSKDGAVTV 116

  Fly   606 QAGPQMWGKVGGLCGTLDGDPNTDLTSRTGKKLATVKAFADAWRVEDRSELCQVENSAEMEFGMD 670
            :...:...|..||||..:...:..:|..| :|:..:: |.:..:|.:..|.|  ||.:|      
Zfish   117 ELDNKYQNKTCGLCGNFNRIRDEFITGNT-EKIGYIE-FGNKHKVFNPMEFC--ENPSE------ 171

  Fly   671 SCEQSKLQKAV-----SVCERLLANEKLGDCIKPFNYDALIRTCMADYCNCANREHPESCNCDAI 730
             .::....||:     :.||.|...:....|  ..:|...:..|:.|.|...:     |..|..:
Zfish   172 -TDEKNNWKAICGSYQADCEELFRAKAWSSC--AMSYHPYVDACVYDRCFSKS-----SSLCATL 228

  Fly   731 AMLAKECAFKGIKLEHGWRNLEICPISCGFGRVYQACGPNVEPTCDSDLALPASKGACNE----G 791
            :..:::|:..| .....||..:.|.::|.:..|:...|.....||.|:    .:...|.|    |
Zfish   229 SEYSRQCSRNG-GTPSTWRTKDFCAVTCPYNTVHFESGSPCIDTCSSE----NTNTQCEEHNIDG 288

  Fly   792 CFCPEGTV---QYKEACITRELCPCSLRGKEFKPESTVKKNCNTCTCKNGQWRCTEDKCGARCGA 853
            ||||.|||   .....||.||.|.|. ..:.:||:..:.:....|.|:||:|.|.......||..
Zfish   289 CFCPPGTVFDDILNMGCIPREQCHCK-HDRIYKPQEELHEVGQDCVCQNGKWNCKIKPVLGRCSV 352

  Fly   854 VGDPHYQTFDGKRYDFMGKCSYHLLKTQNTS---VEAENVACSGAVSESMNFAAPDDPSCTKAVT 915
            ....|:.||||:.:.|.|.|:|.|.|....|   :..:...|:..:.:          :|.|::.
Zfish   353 EEGSHFTTFDGQEFTFHGDCTYVLSKDSVGSKFIILGQISPCASLIYD----------TCLKSID 407

  Fly   916 IRF---------ILRDGTPSVIKLDQGLTTIVNDKPIAKLPKMLGLGEVLIRRASSTFLTVEFAD 971
            :.|         |..|||             |.......||......:.::...||.::.::...
Zfish   408 VIFNSDTVNRLVISEDGT-------------VKHNAAVLLPYTPASRQFVVFSPSSFYILIDTNF 459

  Fly   972 GIRVWWDGV--SRVYIDAPPSLRGQTQGLCGTFNSNTQDDFLTPEGDVETAVEPFADKWRTKDTC 1034
            |:||....|  .:|||......:|:|.||||.||....||..||:|.||.....||:.|..:..|
Zfish   460 GLRVLVQLVPLMQVYITMDKRFQGKTHGLCGNFNKVLADDMKTPQGLVEGTAVSFANAWEVETNC 524

  Fly  1035 QFKAETHQGPHPCTLNPEKKAQAEKFCDWIL--QDIFQDCHFLVEPEQFYEDCLYDTCACKDEMS 1097
            :    :.:...||:.|...:..||.:|..|:  .|:|..||..|.||.:|:.|.|.:|.| :...
Zfish   525 R----SDKSVIPCSHNSVSENYAEHWCYKIMDKSDVFAQCHSKVNPESYYKRCKYASCTC-ERSE 584

  Fly  1098 KCFCPILSAYGTECMRQGVK-TGWRMSVKECA---VKCPLGQVFDECGDGCALSCDDLPSK-GSC 1157
            .|.|.:.|:|...||.:.|. .|||.:|  |.   ..||..|.:......|..:|..|.|: .||
Zfish   585 DCLCAVFSSYVHACMIKNVTLEGWRENV--CGKYIQNCPAPQRYFYYLKSCQPTCLSLSSEHTSC 647

  Fly  1158 KREC--VEGCRCPHGEYVNEDGECVPKKMCHCNFDGMSFRPG 1197
            |.:.  |:||.||.|.|.::||:|||.:.|.|...|...:||
Zfish   648 KEDFVPVDGCACPDGLYKDQDGQCVPIEKCPCYGMGKIAQPG 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmlNP_524060.2 VWD 485..636 CDD:295339 39/158 (25%)
C8 680..754 CDD:285899 15/78 (19%)
TIL 758..811 CDD:280072 20/59 (34%)
VWD 840..1015 CDD:214566 48/188 (26%)
C8 1054..1121 CDD:214843 24/69 (35%)
TIL 1131..1185 CDD:280072 22/56 (39%)
TIL 1245..1298 CDD:280072
VWD 1327..1498 CDD:214566
C8 1535..1609 CDD:214843
Mucin2_WxxW 1751..1837 CDD:290069
TIL 1938..2005 CDD:280072
FA58C 2089..2223 CDD:238014
FA58C 2104..2225 CDD:214572
FA58C <2299..2404 CDD:214572
FA58C <2299..2403 CDD:238014
VWD 2703..2858 CDD:295339
C8 2893..2970 CDD:285899
TIL 2974..3030 CDD:280072
VWD 3035..3198 CDD:295339
C8 3257..3313 CDD:285899
VWC 3397..3451 CDD:302663
GHB_like <3755..3813 CDD:304424
LOC108181583XP_021326301.1 VWD 2..142 CDD:214566 37/153 (24%)
C8 197..251 CDD:312319 11/61 (18%)
TIL 255..311 CDD:307783 20/59 (34%)
VWD 339..505 CDD:214566 48/188 (26%)
C8 540..613 CDD:214843 27/75 (36%)
TIL 620..677 CDD:307783 22/56 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D12226at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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