DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hml and LOC108181583

DIOPT Version :10

Sequence 1:NP_524060.2 Gene:Hml / 39529 FlyBaseID:FBgn0029167 Length:3843 Species:Drosophila melanogaster
Sequence 2:XP_073798921.1 Gene:LOC108181583 / 108181583 -ID:- Length:803 Species:Danio rerio


Alignment Length:884 Identity:242/884 - (27%)
Similarity:369/884 - (41%) Gaps:132/884 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 LCTTWGGINMKTFDGLVFKAPLSCSHTLITDKVSGTFDIILKACPYGSGYGCAHTLKILWQSVLY 548
            :|:||...:.|||||.:::.|..|.:.|::|..|..|.:.:|.....||           ..:..
Zfish     1 MCSTWESFHFKTFDGDIYQYPGLCEYNLVSDCTSKQFSVDVKRTQTSSG-----------PKISR 54

  Fly   549 TFENLNGTM--------QLTTPIKKLPMPVQVMGMKVMPVAQHVQIDLESVGLKLDWDHRQYVSV 605
            ...::||.|        .:...|.||  ||...|:.:.....:..| ....||.:.|.....|:|
Zfish    55 IVVSINGKMFSISENNVMIDDQITKL--PVYESGILIEENTIYTNI-RSKTGLTVMWSKDGAVTV 116

  Fly   606 QAGPQMWGKVGGLCGTLDGDPNTDLTSRTGKKLATVKAFADAWRVEDRSELCQVENSAEMEFGMD 670
            :...:...|..||||..:...:..:|.....:......|.:..:|.:..|.|  ||.:|      
Zfish   117 ELDNKYQNKTCGLCGNFNRIRDEFITEPGNTEKIGYIEFGNKHKVFNPMEFC--ENPSE------ 173

  Fly   671 SCEQSKLQKAV-----SVCERLLANEKLGDCIKPFNYDALIRTCMADYCNCANREHPESCNCDAI 730
             .::....||:     :.||.|...:....|  ..:|...:..|:.|.|...:     |..|..:
Zfish   174 -TDEKNNWKAICGSYQADCEELFRAKAWSSC--AMSYHPYVDACVYDRCFSKS-----SSLCATL 230

  Fly   731 AMLAKECAFKGIKLEHGWRNLEICPISCGFGRVYQACGPNVEPTCDSDLALPASKGACNE----G 791
            :..:::|:..| .....||..:.|.::|.:..|:...|.....||.|:    .:...|.|    |
Zfish   231 SEYSRQCSRNG-GTPSTWRTKDFCAVTCPYNTVHFESGSPCIDTCSSE----NTNTQCEEHNIDG 290

  Fly   792 CFCPEGTV---QYKEACITRELCPCSLRGKEFKPESTVKKNCNTCTCKNGQWRCTEDKCGARCGA 853
            ||||.|||   .....||.||.|.|. ..:.:||:..:.:....|.|:||:|.|.......||..
Zfish   291 CFCPPGTVFDDILNMGCIPREQCHCK-HDRIYKPQEELHEVGQDCVCQNGKWNCKIKPVLGRCSV 354

  Fly   854 VGDPHYQTFDGKRYDFMGKCSYHLLKTQNTS---VEAENVACSGAVSESMNFAAPDDPSCTKAVT 915
            ....|:.||||:.:.|.|.|:|.|.|....|   :..:...|:..:.:          :|.|::.
Zfish   355 EEGSHFTTFDGQEFTFHGDCTYVLSKDSVGSKFIILGQISPCASLIYD----------TCLKSID 409

  Fly   916 IRF---------ILRDGTPSVIKLDQGLTTIVNDKPIAKLPKMLGLGEVLIRRASSTFLTVEFAD 971
            :.|         |..|||             |.......||......:.::...||.::.::...
Zfish   410 VIFNSDTVNRLVISEDGT-------------VKHNAAVLLPYTPASRQFVVFSPSSFYILIDTNF 461

  Fly   972 GIRVWWDGV--SRVYIDAPPSLRGQTQGLCGTFNSNTQDDFLTPEGDVETAVEPFADKWRTKDTC 1034
            |:||....|  .:|||......:|:|.||||.||....||..||:|.||.....||:.|..:..|
Zfish   462 GLRVLVQLVPLMQVYITMDKRFQGKTHGLCGNFNKVLADDMKTPQGLVEGTAVSFANAWEVETNC 526

  Fly  1035 QFKAETHQGPHPCTLNPEKKAQAEKFCDWIL--QDIFQDCHFLVEPEQFYEDCLYDTCACKDEMS 1097
            :    :.:...||:.|...:..||.:|..|:  .|:|..||..|.||.:|:.|.|.:|.| :...
Zfish   527 R----SDKSVIPCSHNSVSENYAEHWCYKIMDKSDVFAQCHSKVNPESYYKRCKYASCTC-ERSE 586

  Fly  1098 KCFCPILSAYGTECMRQGVK-TGWRMSVKECA---VKCPLGQVFDECGDGCALSCDDLPSK-GSC 1157
            .|.|.:.|:|...||.:.|. .|||.:|  |.   ..||..|.:......|..:|..|.|: .||
Zfish   587 DCLCAVFSSYVHACMIKNVTLEGWRENV--CGKYIQNCPAPQRYFYYLKSCQPTCLSLSSEHTSC 649

  Fly  1158 KREC--VEGCRCPHGEYVNEDGECVPKKMCHCNFDGMSFRPGYKEVRPGEKFLDL----CTCTDG 1216
            |.:.  |:||.||.|.|.::||:|||.:.|.|.  ||.     |..:||.. :|:    |.|.:|
Zfish   650 KEDFVPVDGCACPDGLYKDQDGQCVPIEKCPCY--GMG-----KIAQPGTS-IDINGQYCVCVNG 706

  Fly  1217 VWDCQDAEPGDKDKYPPSSELRSKCA-KQPYAEFTKCAPKEPKTCKNMDKYV-ADSSDCLPGCVC 1279
            |..|:..:|...:  .||.::...|: .:|.....||.|    ||  |.|.. ..|..|..||:|
Zfish   707 VLHCESEKPHILE--CPSPKVLFNCSTARPDQHGLKCKP----TC--MQKIENCFSQTCESGCLC 763

  Fly  1280 MEGYVYDTSRLACVLPANCSCHHAGKSYDDGEKIKEDCN 1318
            ..| :.|..|..||...:|.|.|.|:.|....:|..|||
Zfish   764 PSG-LLDDDRGNCVERKDCPCPHGGQLYQPETEITVDCN 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmlNP_524060.2 VWD 485..636 CDD:459671 38/158 (24%)
C8 684..754 CDD:462584 14/69 (20%)
TIL 758..811 CDD:410995 20/59 (34%)
VWD 840..1015 CDD:214566 48/188 (26%)
C8 1054..1121 CDD:214843 24/69 (35%)
TIL 1131..1185 CDD:410995 22/56 (39%)
TIL 1245..1298 CDD:460351 18/53 (34%)
VWD 1327..1498 CDD:214566
C8 1535..1609 CDD:214843
TIL 1938..2005 CDD:473303
FA58C 2089..2223 CDD:238014
FA58C <2299..2403 CDD:238014
VWD 2703..2858 CDD:459671
TIL 2974..3030 CDD:460351
VWD 3035..3198 CDD:459671
C8 3248..3313 CDD:462584
VWC 3397..3451 CDD:450195
GHB_like <3755..3813 CDD:473907
LOC108181583XP_073798921.1 None
Blue background indicates that the domain is not in the aligned region.

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