DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hml and muc5e

DIOPT Version :9

Sequence 1:NP_524060.2 Gene:Hml / 39529 FlyBaseID:FBgn0029167 Length:3843 Species:Drosophila melanogaster
Sequence 2:XP_017209925.1 Gene:muc5e / 101882030 ZFINID:ZDB-GENE-121108-3 Length:623 Species:Danio rerio


Alignment Length:826 Identity:163/826 - (19%)
Similarity:265/826 - (32%) Gaps:288/826 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  2963 TWR---AVAQC--------EINCPSPLVHTDCYKRRCEPSCDNVHGDDCPVLPDACFPGCYCPEG 3016
            |||   |...|        .|:||:..:.|||.:...                           .
Zfish    11 TWRENCADKTCVAGVIEVKAISCPTSQIRTDCPRNMM---------------------------S 48

  Fly  3017 TVRKGPNCVPISECKDCVCNSLGASKYMTYDRKSFSFNGNCTYLLSRDVVLPGVHTFQVYVSMDD 3081
            .||....|....:| ||.|...|...|:::...:|.|..||||.|..:.:|    ..::.:::|:
Zfish    49 LVRDEETCCESWKC-DCQCQVYGDPHYISFQGTTFDFMENCTYTLVEEQLL----NQRLSITVDN 108

  Fly  3082 CKKLGQPTPVEGGSCAKSLHILNGDHVIHV----QRVPQKPKSLQVLVDGFEVKKIPYKDSWISL 3142
            ...|    |....||::.:.:...:.|:.:    :...:...:.:|::..:|.:...::.|    
Zfish   109 YYCL----PEIDDSCSRGITLNYWNDVVTLMVTEEYTVECSLNQEVIIPPYEDQVFRFESS---- 165

  Fly  3143 RQVVGKELVLSLP--ESHVELTASFEDLIFSLGVPSIKYGSKMEGLCGDCNGNAGNDLQPNPAKK 3205
                |.|:.:.:.  .|:|.|| .|..|..||.  ...:.:..:|.||.|.|       |:..::
Zfish   166 ----GSEVYIYIKPIRSYVSLT-PFNSLTISLA--EEYFQNNTQGQCGVCGG-------PSCMRR 216

  Fly  3206 KAGVD-------VIQSWQADEPKLGLVEECLSEDVPKE-HCIP------------------LPPE 3244
            ...|:       ....|..::|     |:...:.||.. .|:|                  :||.
Zfish   217 DGVVEEDTCCDKTAYDWVVEDP-----EKSYCKSVPTNIPCVPPTPPPSTSTSMPHPPSTSMPPP 276

  Fly  3245 KDPC----LQFYNAELFGKCPLAVDPIAYVSACQQDICKPGNTQQGVCVALAAYAKECNQHGICT 3305
            ..||    ....:.|:|.:|...:|.......||.|.| ..|...|.|.:|...|.||.:.|:|.
Zfish   277 PPPCNPTICDLLHHEVFEECAGRIDLTFVEKNCQYDYC-AYNRSVGACSSLEYAASECKKIGVCV 340

  Fly  3306 NWR--RPQLCPYECPSDMVYEPCGCAKNCDTIKALSEFDAVSLKNEAVVHTVKTDEMCLSSERFE 3368
            :||  ....|...||..|||:.|..:.| |..::..:..|.::..             |.|    
Zfish   341 DWRGLTNGSCEIRCPGAMVYDECRQSPN-DVCRSGIQVPATAVAG-------------LRS---- 387

  Fly  3369 GCFCPPGKVMDGGQ---CVPEIACTKCDDGLHLP---DEKWKKDKCTECQCDSKGKTTCVEKKCQ 3427
            |||||.|:::....   ||..  ||.|...|..|   ...|:.: |..|.|:::.:|        
Zfish   388 GCFCPEGQMLAEEHKQICVSH--CTNCKGPLGEPMPVGAVWESN-CHICTCNNQTRT-------- 441

  Fly  3428 VEENICAEGYRPETIVSVDECCPRYRCVPETKDPSKLCLAPLVPICGPGQFKKEKKDVNGCSQYI 3492
                              :||.|        |.|..      .|:||                  
Zfish   442 ------------------EECRP--------KPPGP------TPVCG------------------ 456

  Fly  3493 CECIPKDQCEIIELRELLPGEIIVNVEEGCCPTQKIECKPETCPKAPVNCQERFYEVKTIKEPGM 3557
                                 ...::...||..|  .|..:.|.          |..||.|    
Zfish   457 ---------------------AYSSLTSDCCGNQ--ICVEKICE----------YNGKTYK---- 484

  Fly  3558 CCSKHSCVPPKDLCIVQYELDEATKFTKTVGDKWTHAKEVCKQETCSYGPDGNAQVVSTLEQCLT 3622
                                         |||:||.....|:..:||.......:.|..|:.|..
Zfish   485 -----------------------------VGDRWTDPSHPCESFSCSQTGTEVEKTVCPLQSCAE 520

  Fly  3623 DCAPGFSYQNLDKTKCCGKCVQTSCIFEQKLYEVNALWKSADNCT----TYSC----------LK 3673
            |.      :..|:..||..|..|..:   ::..||.   :..|||    ..||          :.
Zfish   521 DS------RVWDEHHCCYSCNVTCSV---RMTRVNL---TISNCTQEVELASCEGQCETQNRWVP 573

  Fly  3674 KDGQFLVTTSREVCPDVGSCLSHLLYQDGCCKRCKSEPLVEDKSSC 3719
            .:|...:..:.::|.:..|.:..:|.  .|.|..:|.......:.|
Zfish   574 TNGTLQLDQTHQLCEETASEMREILL--NCGKNSQSRFTYRHATRC 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmlNP_524060.2 VWD 485..636 CDD:295339
C8 680..754 CDD:285899
TIL 758..811 CDD:280072
VWD 840..1015 CDD:214566
C8 1054..1121 CDD:214843
TIL 1131..1185 CDD:280072
TIL 1245..1298 CDD:280072
VWD 1327..1498 CDD:214566
C8 1535..1609 CDD:214843
Mucin2_WxxW 1751..1837 CDD:290069
TIL 1938..2005 CDD:280072
FA58C 2089..2223 CDD:238014
FA58C 2104..2225 CDD:214572
FA58C <2299..2404 CDD:214572
FA58C <2299..2403 CDD:238014
VWD 2703..2858 CDD:295339
C8 2893..2970 CDD:285899 4/9 (44%)
TIL 2974..3030 CDD:280072 8/55 (15%)
VWD 3035..3198 CDD:295339 35/168 (21%)
C8 3257..3313 CDD:285899 18/57 (32%)
VWC 3397..3451 CDD:302663 8/56 (14%)
GHB_like <3755..3813 CDD:304424
muc5eXP_017209925.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D12226at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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