DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hml and muc2.1

DIOPT Version :9

Sequence 1:NP_524060.2 Gene:Hml / 39529 FlyBaseID:FBgn0029167 Length:3843 Species:Drosophila melanogaster
Sequence 2:XP_021326446.1 Gene:muc2.1 / 100332798 ZFINID:ZDB-GENE-120904-2 Length:742 Species:Danio rerio


Alignment Length:781 Identity:210/781 - (26%)
Similarity:343/781 - (43%) Gaps:83/781 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   450 EWWSSEETV---------VTMSSYSLYQSNNLDIVIDKTPRPALCTTWGGINMKTFDGLVFKAPL 505
            ||.:|  ||         :.:.|..:..||:::         ::|:.||..:.|||||.|::.|.
Zfish     2 EWRTS--TVCMLLLALSGIQVDSKKVSPSNHVN---------SICSMWGNFHFKTFDGDVYQFPG 55

  Fly   506 SCSHTLITD--KVSGTFDIILKACPYGSGYGCAHTLKILWQSVLYTFENLNGTMQLTTPIKKLPM 568
            .|.:.|::|  .:...|.|.:|.....:|...:.....:....:...||     |:.....|:.:
Zfish    56 MCEYNLVSDCQSLIRQFSIYVKRTERSTGPKISRVSITINDIAIELTEN-----QVNVNEAKVTL 115

  Fly   569 PVQVMGMKVMPVAQHVQIDLESVGLKLDWDHRQYVSVQAGPQMWGKVGGLCGTLDGDPNTDLTSR 633
            ||.|.|:.|.....:.:: ...:|:.:.|:....|.|:...:...:..||||..:|.|..:...:
Zfish   116 PVHVSGILVEENTIYTRL-YSKMGITVMWNKDDAVMVELDSKYSNRTCGLCGDFNGIPVYNEFIQ 179

  Fly   634 TGKKLATVKAFADAWRVEDRSELCQ--VENSAEMEFGMDSCEQSKLQKAVSVCERLLANEKLGDC 696
            :|:.:...: |.:..||.:.:..|:  .||..|... :|.||:.:..     |..||.:||...|
Zfish   180 SGRTVGYTE-FGNMHRVPNPTHQCEDPFENVDEQNV-VDQCEKYRAD-----CADLLEDEKWSSC 237

  Fly   697 IKPFNYDALIRTCMADYCNCANREHPESCNCDAIAMLAKECAFKGIKLEHGWRNLEICPISCGFG 761
            ....:.:|.|:.|..|.||....:...:..|..:...:::|:..|.. ...||..:.|.:.|.:.
Zfish   238 SWVLDPEAYIKACTNDLCNRQPEDEDTTALCATLTEYSRQCSHAGGN-PPAWRTAKFCNVQCPYN 301

  Fly   762 RVYQACGPNVEPTCDSDLALPASKGACNE----GCFCPEGTVQYKE----ACITRELCPCSLRGK 818
            .|:...|.....||..    ..:...|.|    |||||.||| :.:    .||..|.|.|. ..:
Zfish   302 MVHSESGSPCMDTCSH----KDTNALCEEHNIDGCFCPPGTV-FDDISDTGCIPAEKCQCK-HDR 360

  Fly   819 EFKPESTVKKNCNTCTCKNGQWRCTEDKCGARCGAVGDPHYQTFDGKRYDFMGKCSYHLLKTQNT 883
            .:.....::|:...|.|:.|.|.|........|......|:.|||||.:.|.|.|:|.|.|....
Zfish   361 VYSSGEVLRKSEEECYCQEGSWVCMSIPGPGLCAVEEGSHFTTFDGKEFTFHGDCNYLLSKDCEE 425

  Fly   884 S---VEAENVACSGAVSESMNFAAPDDPSCTKAVTIRFILRDGTPSVIKLDQGLTTIVNDKPIAK 945
            |   :..:.|.|         |....| :|.|::.:.|......|..||.|   .|:.::..:: 
Zfish   426 SKFIILGQIVPC---------FTHETD-TCLKSIVVLFDNDKKNPLFIKAD---GTVQHNAEVS- 476

  Fly   946 LPKMLGLGEVLIRRASSTFLTVEFADGIRVWWDGV--SRVYIDAPPSLRGQTQGLCGTFNSNTQD 1008
            ||.|  ..:..:.|.||..:.::...|::|....|  .:|||....|.:|:|.||||.||....|
Zfish   477 LPYM--TADFTVFRPSSFHIILQTVFGLQVQVQLVPLMQVYITVDQSFQGKTCGLCGNFNKVLAD 539

  Fly  1009 DFLTPEGDVETAVEPFADKWRTKDTCQFKAETHQGPHPCTLNPEKKAQAEKFCDWI--LQDIFQD 1071
            |..||:|.||.....||:.|:.:..|..::|  :...||:.:.:.:..||.:|..:  .:.:|..
Zfish   540 DLKTPQGVVEGTAVSFANAWKAQSNCPDRSE--RMDDPCSYSSDSEHFAEHWCSKMKDKESLFAQ 602

  Fly  1072 CHFLVEPEQFYEDCLYDTCACKDEMSKCFCPILSAYGTECMRQGV-KTGWRMSVKECAVK-CPLG 1134
            ||..|.|:.:|:.|.|.:|.| ::...|.|.:.|:|...|..:|| ..|||..|.:..:| ||..
Zfish   603 CHATVNPDSYYKRCKYSSCTC-EKSEDCLCTVFSSYARACAAKGVILEGWREVVCDKYIKDCPAS 666

  Fly  1135 QVFDECGDGCALSCDDLPS-KGSCKREC--VEGCRCPHGEYVNEDGECVPKKMCHCNFDGMSFRP 1196
            |.:......|..:|..|.| :.||..:.  |:||.||.|.|.:|:..|||.:.|.|..:|....|
Zfish   667 QSYSYELQSCQRTCVSLASERQSCNVDFVPVDGCACPDGLYQDENNLCVPMEKCPCYHNGQKIHP 731

  Fly  1197 G 1197
            |
Zfish   732 G 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmlNP_524060.2 VWD 485..636 CDD:295339 36/152 (24%)
C8 680..754 CDD:285899 17/73 (23%)
TIL 758..811 CDD:280072 18/60 (30%)
VWD 840..1015 CDD:214566 53/179 (30%)
C8 1054..1121 CDD:214843 21/69 (30%)
TIL 1131..1185 CDD:280072 20/56 (36%)
TIL 1245..1298 CDD:280072
VWD 1327..1498 CDD:214566
C8 1535..1609 CDD:214843
Mucin2_WxxW 1751..1837 CDD:290069
TIL 1938..2005 CDD:280072
FA58C 2089..2223 CDD:238014
FA58C 2104..2225 CDD:214572
FA58C <2299..2404 CDD:214572
FA58C <2299..2403 CDD:238014
VWD 2703..2858 CDD:295339
C8 2893..2970 CDD:285899
TIL 2974..3030 CDD:280072
VWD 3035..3198 CDD:295339
C8 3257..3313 CDD:285899
VWC 3397..3451 CDD:302663
GHB_like <3755..3813 CDD:304424
muc2.1XP_021326446.1 VWD 33..177 CDD:214566 36/149 (24%)
C8 228..294 CDD:312319 16/66 (24%)
TIL 298..354 CDD:307783 18/60 (30%)
VWD 393..547 CDD:306577 51/169 (30%)
C8 583..653 CDD:214843 22/70 (31%)
TIL 663..720 CDD:307783 20/56 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D12226at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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