DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hml and LOC100332723

DIOPT Version :9

Sequence 1:NP_524060.2 Gene:Hml / 39529 FlyBaseID:FBgn0029167 Length:3843 Species:Drosophila melanogaster
Sequence 2:XP_002667589.3 Gene:LOC100332723 / 100332723 -ID:- Length:778 Species:Danio rerio


Alignment Length:931 Identity:239/931 - (25%)
Similarity:347/931 - (37%) Gaps:276/931 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  2975 PSPLVHTDCYK----------------RRCEPSCDNVHGDDCPVLPDACFP--GCYCPEGTVRKG 3021
            |:|..|.||.:                .||..  ||:    ..::|..|.|  ...|..|   |.
Zfish    15 PTPTPHYDCPEWDKNTNETFILCNCTMARCIE--DNI----IEIIPFECPPLQNITCENG---KN 70

  Fly  3022 P-------NCVPISECKDCVCNSLGASKYMTYDRKSFSFNGNCTYLLSRDVVLPGVHTFQVYVSM 3079
            |       .|.....| ||.|...|...|:|:|...:|:.|||||:|..: :.|..| ..:|:..
Zfish    71 PVLVYDEHYCCQYYTC-DCFCEGWGDPHYITFDGLFYSYQGNCTYILMEE-IRPQYH-LTIYIDN 132

  Fly  3080 DDCKKLGQPTPVEGGSCAKSLHILNGDHVIHVQRVPQKPKS--------LQVLVDGFEVKKIPYK 3136
            ..|      .|:|..||.:|:.:...:.||.:       |:        |:.|: |..:..:||.
Zfish   133 VFC------DPIEHVSCPRSIIVSYNNQVITL-------KNHNFFGGAELEALM-GDVLLTLPYA 183

  Fly  3137 DSWISLRQVVGK--ELVLSLPESHVELTASFEDLIFSLGVPSIKYGSKMEGLCGDCNGNAGND-L 3198
            .:.:   :||..  :|.||:|:.:|::  ||....||:.:|...:|:..:|.||.||.|..:| :
Zfish   184 HNGV---RVVSSSLDLFLSIPQLNVDV--SFGATGFSINLPFQHFGNNTQGHCGTCNNNKADDCM 243

  Fly  3199 QPNPAKKKAGVDVIQSWQADEPKLGLVEEC-------LSEDVPKEHCIP---LP-------PEKD 3246
            .|      .|:              ||::|       .:..|..|.|.|   ||       |...
Zfish   244 IP------GGI--------------LVDDCSVMADYWAASGVNDEMCTPPTALPTVGGDIKPTPK 288

  Fly  3247 PCLQ-----FYNAELFGKCPLAVDPIAYVSACQQDICKPGNTQQGVCVALAAYAKECNQHGICTN 3306
            ||..     ...:|||..|...|.|..:...|:.|.|...|... ||.:|.:||:.|:|.|||.:
Zfish   289 PCKAHPDCFLLGSELFEACHAHVSPENFFMGCEYDSCHMSNPAV-VCTSLQSYARSCSQLGICVH 352

  Fly  3307 WRR-PQLCPYECPSDMVYEPCGCAK--NCDTIKALSEFDAVSLKNEAVVHTVKTDEMCLSSERFE 3368
            ||. ..||..||..|.|:.|||.|:  :||.|.            |....||.|          |
Zfish   353 WRNYTNLCNIECAEDKVFNPCGPAEPPSCDDIP------------EQRTITVPT----------E 395

  Fly  3369 GCFCPPGKVM---DGGQCVPEIACTKCDDGLHLPDEKWKKDKCTECQCDSKGKT-TCVEKKCQVE 3429
            |||||.|.::   |.|.||.:..|..........||.::.: |.||.|:...|: ||..|.|   
Zfish   396 GCFCPEGTMLFNKDSGVCVSKCGCMDASGTPREFDEVFEYN-CEECVCERASKSVTCKPKSC--- 456

  Fly  3430 ENICAEGYRPETIVSVDECCPRYRCVPETKDPSKLCLAPLVPICGPGQFKKEKKDVNGCSQYICE 3494
                 .|..||.                                              |::    
Zfish   457 -----PGGNPEV----------------------------------------------CTE---- 466

  Fly  3495 CIPKDQCEIIELRELLPGEIIVNV---EEGCCPTQKIECKPETCPKAPVNCQERFYEVKTIKEPG 3556
                            ||.::||.   .|.||..|...|....||.....|...:..:..:.| |
Zfish   467 ----------------PGFVLVNYTDPSEPCCSKQVCNCDVSMCPPLDKKCNIGYAPILDVPE-G 514

  Fly  3557 MCCSKHSCVPPKDLCI---VQYELDEATKFTKTVGDKWTHAKEVCKQETCSYGPDGNAQ---VVS 3615
            .||.:..| .||.:|:   .:||    ...|..|.|        |::..|::..|..:|   :..
Zfish   515 KCCPEIKC-EPKKVCVHKNTEYE----PGTTIPVID--------CQECKCTWDVDPKSQFFKIKC 566

  Fly  3616 TLEQCLTDCAPGFSYQNLDKTKCCGKCVQTSCI-----FEQKLYEVNALWKSADNCTTYSCLKKD 3675
            ...||...|.||:.|.: |.:.||||||||.|:     ....|.|..:|..|...|...:|.|.:
Zfish   567 GFVQCNEKCDPGYEYID-DFSDCCGKCVQTHCVVNIDGVNHVLQEGASLPTSNPGCDKITCSKVN 630

  Fly  3676 GQFLVTTSREVCP--DVGSCL--SHLLYQDGCCKRCKSEPLVEDKSSCLPVSLAESRTKEILKFP 3736
            |||:.......||  ::.:|.  :..|..||||..|     |:....|...|:     ::.:|  
Zfish   631 GQFITVKYTVQCPPFNISNCQPGTVQLSADGCCHVC-----VDQIKGCQVQSI-----RDFIK-- 683

  Fly  3737 VQGHGTCVNADPIQGFTDCEGACSSGSKYNTLTDMHEKFCTCCSIKSYHPISVKMICDDG----H 3797
               |..| .::.......|.|.|:|.|:|   .:.....|:||........:|.:.|.:|    |
Zfish   684 ---HNDC-QSEKKMDLAFCGGDCNSFSRY---ANPGLSSCSCCQATRSSNRTVDLACVNGDIINH 741

  Fly  3798 TFTQKHEVPSNCGCS--PCSE 3816
            |:....|    |.||  .|.|
Zfish   742 TYIHVEE----CSCSRTKCHE 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmlNP_524060.2 VWD 485..636 CDD:295339
C8 680..754 CDD:285899
TIL 758..811 CDD:280072
VWD 840..1015 CDD:214566
C8 1054..1121 CDD:214843
TIL 1131..1185 CDD:280072
TIL 1245..1298 CDD:280072
VWD 1327..1498 CDD:214566
C8 1535..1609 CDD:214843
Mucin2_WxxW 1751..1837 CDD:290069
TIL 1938..2005 CDD:280072
FA58C 2089..2223 CDD:238014
FA58C 2104..2225 CDD:214572
FA58C <2299..2404 CDD:214572
FA58C <2299..2403 CDD:238014
VWD 2703..2858 CDD:295339
C8 2893..2970 CDD:285899
TIL 2974..3030 CDD:280072 17/79 (22%)
VWD 3035..3198 CDD:295339 49/173 (28%)
C8 3257..3313 CDD:285899 20/56 (36%)
VWC 3397..3451 CDD:302663 14/54 (26%)
GHB_like <3755..3813 CDD:304424 18/63 (29%)
LOC100332723XP_002667589.3 VWD 79..247 CDD:214566 54/195 (28%)
C8 304..358 CDD:312319 20/54 (37%)
TIL 364..419 CDD:307783 25/76 (33%)
CT 675..752 CDD:214482 20/94 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D12226at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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