DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hml and LOC100149773

DIOPT Version :9

Sequence 1:NP_524060.2 Gene:Hml / 39529 FlyBaseID:FBgn0029167 Length:3843 Species:Drosophila melanogaster
Sequence 2:XP_021326452.1 Gene:LOC100149773 / 100149773 -ID:- Length:639 Species:Danio rerio


Alignment Length:843 Identity:191/843 - (22%)
Similarity:293/843 - (34%) Gaps:276/843 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  3035 CNSLGASKYMTYDRKSFSFNGNCTYLLSRDVVLPGVHTFQVYVSMDDCKKLGQPTPVEGGSCAKS 3099
            |...|.|.|:|:|...:::.|||||:|.:::  .......:|:....|      .|.|..||.:|
Zfish     8 CQGWGDSHYITFDGLYYNYQGNCTYILMKEI--SPQFNLAIYIENVYC------DPAENVSCPRS 64

  Fly  3100 L-------------HILNGDHVIHVQ----RVPQKPKSLQVLVDGFEVKKIPYKDSWISLRQVVG 3147
            |             |.|.|...:.|:    |..|:..|   .::|..:..:||.::.:   :|:.
Zfish    65 LIVSYNKQNITLRSHRLMGGANLEVRLLYSRTEQRFCS---ALEGNIMLALPYDNNGL---RVIS 123

  Fly  3148 KELVLSLPESHVELTASFEDLIFSLGVPSIKYGSKMEGLCGDCNGNAGNDLQPNPAKKKAGVDVI 3212
            .:|.|.|....:.....|....||:.:|...:|...||.||.||.|                   
Zfish   124 SDLNLLLEIPKLNAYVLFGVSGFSINLPFQYFGKNTEGQCGTCNNN------------------- 169

  Fly  3213 QSWQADEPKLGLVEEC--LSEDVPKEHC---IPLP----PEKDPCLQFYNAELFGKCPLAVDPIA 3268
               |.|:....|..:|  ::|:.....|   .|||    |...|.....|. .|..|...|.|..
Zfish   170 ---QNDDCPGSLANDCKIMAENWNTTVCTPPAPLPTPNSPHVHPDCYLLNT-TFEACHSHVPPEN 230

  Fly  3269 YVSACQQDICKPGNTQQGVCVALAAYAKECNQHGICTNWRR-PQLCPYECPSDMVYEPCGCAKNC 3332
            :.||||.|   ..|....||.:|.:||..|...|:|..||. ...|...|..|.|:.|||     
Zfish   231 FFSACQYD---SSNNPAEVCASLQSYASVCAMFGVCIYWRNYTSQCNIGCSEDKVFLPCG----- 287

  Fly  3333 DTIKALSEFDAVSLKNEAVVH--TVKTDEMCLSSERFEGCFCPPGKVM---DGGQCVPEIACTKC 3392
                   .|:..:.::..:..  ||.|          |||||.....:   |.|.|||:      
Zfish   288 -------SFEPPTCRDRQMESNITVST----------EGCFCSQNTTLFTKDSGVCVPQ------ 329

  Fly  3393 DDGLHLPDEKWKKDKCTECQC-DSKGKTTCVEKKCQVEENICAEGYRPETIVSVDECCPRYRCVP 3456
                             .|.| ||.||                    |..::..     |.:...
Zfish   330 -----------------PCGCLDSSGK--------------------PRRVLYT-----RIKTFN 352

  Fly  3457 ETKDPSKLCLAPLVPICGPGQFKKEKKDVNGCSQYICECIPKDQCEIIELRELLPGEIIVNVEEG 3521
            |                         ...:.|...:|:   |.:..:|                 
Zfish   353 E-------------------------NFTHNCEDCVCD---KARMSVI----------------- 372

  Fly  3522 CCPTQKIECKPETCPKA-PVNCQERFYEVKTIKEPGMCCSKHSCVPPKDLCIVQYELDEATKFTK 3585
                    |:|:.||.. ||||.|.|..|........|||:..                      
Zfish   373 --------CEPKKCPDVPPVNCTEPFMVVNVTDPSEPCCSRQD---------------------- 407

  Fly  3586 TVGDKWTHAKEVCKQETCSYGPDGNAQVVSTLEQCL----TDCAPGFSYQNLDKTKCCGKCVQTS 3646
              |.::   |..|:..||::..|.....::.:| |:    .|||.||.|...| .:|||.|||.:
Zfish   408 --GQEF---KYKCETVTCNHINDSFEMNITNME-CIQLSSEDCASGFQYMKKD-GECCGSCVQVA 465

  Fly  3647 CIFEQKLYEVNALWKSAD---NCTTYSCLKKDGQFLVTTSREVCPDVG--SCL--SHLLYQDGCC 3704
            ||::......:.|.:...   :|...:|||::..|.:....:.||...  .|:  :....:||||
Zfish   466 CIYDAPDKTTHVLQEGLSYNISCMNVTCLKRNDVFTIKEEMKKCPSFNQDDCVEGTKQFDEDGCC 530

  Fly  3705 KRCKSEPLVEDKSSCLPVSLAESRTKEILKFPVQGHGTCVNADPIQGFTDCEGACSSGSKYNTLT 3769
            ..|::.       :|.||       |.:.:..|   ..|.:.:.:: .|.|.|.|.|.|   || 
Zfish   531 PNCETR-------NCAPV-------KNVTRLKV---NNCTSTEDVE-ITSCAGHCDSKS---TL- 573

  Fly  3770 DMH---EKFCTCCSIKSYHPISVKMICDDG--------HTFTQKHEVPSNCGCSP--CSEFSD 3819
            |:|   ...|:||..:......|.::|:|.        |.:|    ....|.|:|  |.::::
Zfish   574 DLHGYMMNSCSCCQAERSSIREVTLMCEDDWQKWLNIRHNYT----YIETCTCTPVMCEDYNN 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmlNP_524060.2 VWD 485..636 CDD:295339
C8 680..754 CDD:285899
TIL 758..811 CDD:280072
VWD 840..1015 CDD:214566
C8 1054..1121 CDD:214843
TIL 1131..1185 CDD:280072
TIL 1245..1298 CDD:280072
VWD 1327..1498 CDD:214566
C8 1535..1609 CDD:214843
Mucin2_WxxW 1751..1837 CDD:290069
TIL 1938..2005 CDD:280072
FA58C 2089..2223 CDD:238014
FA58C 2104..2225 CDD:214572
FA58C <2299..2404 CDD:214572
FA58C <2299..2403 CDD:238014
VWD 2703..2858 CDD:295339
C8 2893..2970 CDD:285899
TIL 2974..3030 CDD:280072
VWD 3035..3198 CDD:295339 46/179 (26%)
C8 3257..3313 CDD:285899 20/56 (36%)
VWC 3397..3451 CDD:302663 7/54 (13%)
GHB_like <3755..3813 CDD:304424 19/68 (28%)
LOC100149773XP_021326452.1 VWD 8..174 CDD:306577 48/201 (24%)
C8 212..270 CDD:312319 21/61 (34%)
CT 545..624 CDD:214482 22/90 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D12226at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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