DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8757 and rdh8a

DIOPT Version :10

Sequence 1:NP_648664.2 Gene:CG8757 / 39528 FlyBaseID:FBgn0036380 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_957001.1 Gene:rdh8a / 280648 ZFINID:ZDB-GENE-021115-3 Length:318 Species:Danio rerio


Alignment Length:247 Identity:69/247 - (27%)
Similarity:108/247 - (43%) Gaps:67/247 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVAVVSGASAGIGAACTRALIGAGMIVVGLARRHERVEKLRSGLSLEQQSRLHAIKC--DITQED 69
            ||.:::|.|:|||.          .|.|.|||              ::|.|.|.|..  |:.::|
Zfish     8 KVVLITGCSSGIGL----------RIAVLLAR--------------DEQKRYHVIATMRDLKKKD 48

  Fly    70 QVLKA-----------------FDWTCRQLGG------VDVLVSNAGI--IGTGELSERDDGPAM 109
            ::::|                 .|.:.||...      :|||::|||:  :|..|....|:   |
Zfish    49 RLVEAAGEVYGQTLTLLPLDICSDESVRQCVNSVKDRHIDVLINNAGVGLLGPVESISMDE---M 110

  Fly   110 RSTIETNIMGTVYCVRESFRSMKRRGTEGHVVIVNSVAGYQ--VPNLGPQLPSLNIYPATKFALR 172
            :...|||..|||..::|....||:| ..||::|::||.|.|  |.|        ::|.|:|||:.
Zfish   111 KRVFETNFFGTVRMIKEVMPDMKKR-QAGHIIIMSSVMGLQGVVFN--------DVYTASKFAIE 166

  Fly   173 AMNEIYRQEFQRHKTAVRVSTVSPGIVDTVILPEQIQGIIKQHMPMLRSDDV 224
            ...|  ....|..|..|::|.:.||.|.|....:.::.:.|...|....|.|
Zfish   167 GFCE--SMAVQLLKFNVKLSLIEPGPVHTEFETKMMEEVAKMEYPGADPDTV 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8757NP_648664.2 Rossmann-fold NAD(P)(+)-binding proteins 1..247 CDD:473865 69/247 (28%)
rdh8aNP_957001.1 type1_17beta-HSD-like_SDR_c 8..265 CDD:187666 69/247 (28%)

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