DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8757 and Rdh8

DIOPT Version :9

Sequence 1:NP_648664.2 Gene:CG8757 / 39528 FlyBaseID:FBgn0036380 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001025461.1 Gene:Rdh8 / 235033 MGIID:2685028 Length:317 Species:Mus musculus


Alignment Length:266 Identity:73/266 - (27%)
Similarity:106/266 - (39%) Gaps:54/266 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVAVVSGASAGIGAACTRALI---GAGMIVVGLARRHERVEKLRSGLSLEQQSRLHAIKCDITQE 68
            :..::||.|:|||......|.   .....||...|...:.|.|.:.........|..::.|:..:
Mouse     6 RTVLISGCSSGIGLELALQLAHDPRQRYQVVATMRDLGKKEPLEAAAGEALGKTLSVVQLDVCND 70

  Fly    69 DQVLKAFDWTCRQLGGVDVLVSNAGIIGTGELSERDDG---PAMRSTIETNIMGTVYCVRESFRS 130
            :.|.......  :.|.|||||:|||:...|.|    :|   ..|:|...||..|.|..|:.....
Mouse    71 ESVTDCLSHI--EGGQVDVLVNNAGVGLVGPL----EGLSLATMQSVFNTNFFGAVRLVKAVLPG 129

  Fly   131 MKRRGTEGHVVIVNSVAGYQVPNLGPQLPSLNIYPATKFALRAMNE---IYRQEFQRHKTAVRVS 192
            |||| .:||:|:|:||.|.|.....      ::|.|:||||....|   |..::|.     :.:|
Mouse   130 MKRR-RQGHIVVVSSVMGLQGVMFN------DVYAASKFALEGFFESLAIQLRQFN-----IFIS 182

  Fly   193 TVSPGIVDTVILPEQIQGIIKQHMP--------------------MLRS-----DDVADAVLWAI 232
            .|.||.|.|....:.:..:.|...|                    :.||     .|||..:...|
Mouse   183 MVEPGPVTTDFEGKLLAQVSKAEFPDTDPDTLGYFRDLYLPASRELFRSVGQSPRDVAQVIAKVI 247

  Fly   233 GT--PP 236
            ||  ||
Mouse   248 GTTRPP 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8757NP_648664.2 YdfG 1..252 CDD:226674 73/266 (27%)
NADB_Rossmann 1..247 CDD:304358 73/266 (27%)
Rdh8NP_001025461.1 NADB_Rossmann 6..263 CDD:304358 73/266 (27%)
adh_short 6..201 CDD:278532 61/212 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1205
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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