DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bru3 and WHI3

DIOPT Version :10

Sequence 1:NP_001369050.1 Gene:bru3 / 39527 FlyBaseID:FBgn0264001 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_014202.1 Gene:WHI3 / 855524 SGDID:S000005141 Length:661 Species:Saccharomyces cerevisiae


Alignment Length:359 Identity:77/359 - (21%)
Similarity:119/359 - (33%) Gaps:116/359 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 IPHGLNGTGQPPSLPSPTMPNFNMGANTPNGQPG------GAAAAAAA-----------AAAADG 235
            ||..:||.   .|.|.|:.|....| ||...|.|      .||:.|.|           |::.:|
Yeast   335 IPSSINGY---MSTPQPSTPTLEWG-NTSASQHGSSFFLPSAASTAIAPTNSNTSANANASSNNG 395

  Fly   236 VFTNGIPQ--TAFPGHPL---------HLT----IPPQGLPNGDAATL---------------QH 270
            ...||..|  :|....|:         .||    :||.||.:..:..:               |:
Yeast   396 ASNNGANQALSASSQQPMMQIGNTINTSLTSSNSLPPYGLMSSQSQHISNMVNTSDMNITPQKQN 460

  Fly   271 AFPGLPPFPGVAFPAVYGQFPQALPPP-LAAVAPTQREDFLMFPGCSISGPEG------------ 322
            .|...|. |...:|......||.:||. |::...:.:.:.......:|:|...            
Yeast   461 RFMQQPQ-PEHMYPVNQSNTPQKVPPARLSSSRNSHKNNSTTSLSSNITGSASISQADLSLLARI 524

  Fly   323 ------------CN-LFIYHLPQEFGDAELMQMF--------LPFGNVISSKVFIDRATNQSKCF 366
                        || |::.:||.:..:.||.|:|        |.|.|        ...|:.....
Yeast   525 PPPANPADQNPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRN--------KNTTSNGHSH 581

  Fly   367 G---FVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPYXQSEFLKRNSQQPTGATTSA 428
            |   ||.||:.:.|..|:..:.|         .||.|...:|:.. :..|    |:.|.|...  
Yeast   582 GPMCFVEFDDVSFATRALAELYG---------RQLPRSTVSSKGGIRLSF----SKNPLGVRG-- 631

  Fly   429 TGALPTTTAFSAATPTSAVTSVSATVTTTAHYNN 462
                |.:....:..|...|..:|:..:...|..|
Yeast   632 ----PNSRRGGSGNPNPNVNMLSSYNSNVGHIKN 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru3NP_001369050.1 RRM2_CELF3_4_5_6 40..120 CDD:410043
ELAV_HUD_SF 43..404 CDD:273741 66/299 (22%)
RRM3_CELF3_4_5_6 319..397 CDD:241083 22/113 (19%)
WHI3NP_014202.1 dRRM_Rrp7p 510..>559 CDD:454777 8/48 (17%)
RRM_scw1_like 536..624 CDD:409691 26/108 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.