Protein Alignment bru3 and RIE1

DIOPT Version :9

• Sequence 1: NP_001369050.1
• Gene: bru3 / 39527
• FlyBaseID: FBgn0264001
• Length: 552
• Species: Drosophila melanogaster
• Sequence 2: NP_011766.3
• Gene: RIE1 / 853165
• SGDID: S000003482
• Length: 781
• Species: Saccharomyces cerevisiae
• Alignment Length: 642
• Identity: 116/642 - (18%)
• Similarity: 198/642 - (30%)
• Gaps: 196/642 - (30%)

  Fly    31 ENESRSEHLDR--------------KLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRG-PDGAS 80
            ::|...:|:|:              .:|||.::|..:..::..:|..:|.|....::.. ..|..
Yeast   171 KSEPIGQHIDKWSIGVNKHALTYPGNIFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEP 235

  Fly    81 KGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMN------- 138
            .|..|:.:....:|...|..|:| :|:.|  |:|.:.|....|||:......:..:.|
Yeast   236 NGYGFISYPLGSQASLCIKELNG-RTVNG--STLFINYHVERKERERIHWDHVKENNNDDNFRCL 297

  Fly   139 ---------------LLNP------------FVFNQFSPYGAYAQQQQQAALMAAAATAPGSAAA 176
                           |:.|            ..|..|.....|..::..        |...|:.:
Yeast   298 FIGNLPYHNPEKVETLITPKEVIEVIKKELSKKFPDFDIISYYFPKRSN--------TRSSSSVS 354

  Fly   177 YMNPMAALATQIPHGLNGTGQPPSLPSPTMPNFNMGANTPNGQPGGAAAAAAAAAAADGVFTNG- 240
            :....:..:.:..:..||..|...:    :..:.......:.|      |.||....:|...:|
Yeast   355 FNEEGSVESNKSSNNTNGNAQDEDM----LKGYGFIKLINHEQ------ALAAIETFNGFMWHGN 409

  Fly   241 -------IPQTAFPGHPLHLTIPPQGLPNGDAATLQHAFPGLPPFPGVAFPAVY----------- 287
                   :....:..|..|...|.....| |...|:.|...:..:....:...|
Yeast   410 RLVVNKAVQHKVYNNHNSHDRHPSISNHN-DMEVLEFANNPMYDYNNYTYDRYYFNNNKNGNSND 473

  Fly   288 ----GQFPQALPPPLAA---VAPTQRE------------------DFLMFPGCSISGP------E 321
                ..|......|:|.   :...|||                  |...:|..|.|.|      :
Yeast   474 TSNVRYFDSVRSTPVAEKMDLFYPQRESFSEGRGQRVPRFMGNKFDMYQYPSTSYSLPIPMSNQQ 538

  Fly   322 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFI-------------------DRATNQSKCFG 367
            ..||::.|:|..:.|.:|...:..||.:||.||..                   |.....|:.:|
Yeast   539 ESNLYVKHIPLSWTDEDLYDFYKSFGEIISVKVITVGGSKNKYRQQSNDSSSDNDLPVGSSRGYG 603

  Fly   368 FVSFDNPASAQAAIQAMNGFQI----------GMKRLKVQLKRPKDASRPYXQSEFLKRNSQ--- 419
            ||||::|..|..||...:|:|:          ..||..:......|.|:.. .|:|  :|.|
Yeast   604 FVSFESPLDAAKAILNTDGYQVSKDQVLSVSFAQKRGNLSSSDDDDQSQTDNSSKF--QNFQPHN 666

  Fly   420 -----QPTGATTSATGALPTTTAFSAAT-----------PTSAVTSVSATVTTTAHYNNL----- 463
                 .||........||.|........           |.:....|::....:|:.||.
Yeast   667 DYHKAYPTKYNKKFINALMTQNQSQQQVSRENYFIPLQYPNTNTKPVNSYNLISANQNNANWMMP 731

  Fly   464 ---GSSFRPTLP-----LPTESSNHNAHIPYTFASWRSGTYCYRNHNNNSENYSDNN 512
               ...|.|.:|     :|.::...| |||           ...|.:|..|.:|..:
Yeast   732 MFPSFGFIPQVPPVPYIIPPQNPAAN-HIP-----------IMANGSNEEEEFSSGD 776

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bru3	NP_001369050.1	RRM2_CELF3_4_5_6	40..120	CDD:410043	20/94 (21%)
		ELAV_HUD_SF	43..404	CDD:273741	85/474 (18%)
		RRM3_CELF3_4_5_6	319..397	CDD:241083	28/112 (25%)
RIE1	NP_011766.3	PABP-1234	195..757	CDD:130689	105/585 (18%)
		RRM3_CELF1-6	542..634	CDD:409797	24/91 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100683
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900